prot_Ecto-sp8_S_contig98964.31731.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98964.31731.1
Unique Nameprot_Ecto-sp8_S_contig98964.31731.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length107
Homology
BLAST of mRNA_Ecto-sp8_S_contig98964.31731.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 8.260e-60
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0
Query:    1 MQVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTK 99
            M VMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTK
Sbjct:   69 MAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTK 167          
BLAST of mRNA_Ecto-sp8_S_contig98964.31731.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 1.990e-58
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0
Query:    1 MQVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTK 99
            M VMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTK
Sbjct:  185 MAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTK 283          
BLAST of mRNA_Ecto-sp8_S_contig98964.31731.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.950e-42
Identity = 75/98 (76.53%), Postives = 87/98 (88.78%), Query Frame = 0
Query:    3 VMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKV 100
            VM+RANI DVKG VL E + S GTF  PRGRY++EMYS F+RMHGS+YDYKIQY DI+KLFLLEKPD+RYVAFVISLDKP+RQGQQ+YQHLVL+ +KV
Sbjct:  148 VMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKV 245          
BLAST of mRNA_Ecto-sp8_S_contig98964.31731.1 vs. uniprot
Match: A0A7S0C3Q8_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3Q8_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.250e-37
Identity = 60/99 (60.61%), Postives = 86/99 (86.87%), Query Frame = 0
Query:    2 QVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKV 100
            ++M +ANI +  G V+ EF+ES+GTF  PRGRY++E+Y  F+R+ G++YDYKI+Y+DI++LFLL KPD+ ++AFVI+LDKPIRQGQQ+YQ+LV++TTKV
Sbjct:   74 RIMTKANIKNTSGNVICEFDESKGTFLTPRGRYTIELYDSFLRLRGNKYDYKIKYDDITRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVMQTTKV 172          
BLAST of mRNA_Ecto-sp8_S_contig98964.31731.1 vs. uniprot
Match: A0A7S2US25_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2US25_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.400e-36
Identity = 61/96 (63.54%), Postives = 83/96 (86.46%), Query Frame = 0
Query:    4 MERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTK 99
            M++ANI +  G V+VEF+E +GTF  PRGRY +E+Y  F+RM G++YDYKI+Y+DIS+LFLL KPD+ ++AFVI+LDKPIRQGQQ+YQ+LV++TTK
Sbjct:    1 MKKANIKNTTGDVIVEFDEEKGTFLTPRGRYMIELYDTFLRMRGNKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVMQTTK 96          
BLAST of mRNA_Ecto-sp8_S_contig98964.31731.1 vs. uniprot
Match: A0A6U3RIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RIK7_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.000e-34
Identity = 63/98 (64.29%), Postives = 85/98 (86.73%), Query Frame = 0
Query:    2 QVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTK 99
            ++M+ ANI +  G V+VEF+ES+GTF  PRGRY++E+Y  F+RM G++YDYKI+Y+DISKLFLL KPD+ ++AFVI+LDKPIRQGQQ+YQ LV++TTK
Sbjct:  229 RIMKMANIKNTTGSVIVEFDESRGTFLTPRGRYTIELYDSFLRMRGNKYDYKIKYDDISKLFLLPKPDDVHMAFVIALDKPIRQGQQRYQMLVMQTTK 326          
BLAST of mRNA_Ecto-sp8_S_contig98964.31731.1 vs. uniprot
Match: A0A7R9VM85_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VM85_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.240e-34
Identity = 61/98 (62.24%), Postives = 82/98 (83.67%), Query Frame = 0
Query:    2 QVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTK 99
            ++M+ ANI    G V+VE  E +GTF  PRGRY++E+Y  F+RM G++YDYKI+Y+DIS+LFLL KPDE ++AFVI+LDKPIRQGQQ+YQ+LV++TTK
Sbjct:   53 RIMKNANIKRTTGDVIVEIPEEKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTK 150          
BLAST of mRNA_Ecto-sp8_S_contig98964.31731.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.920e-33
Identity = 60/98 (61.22%), Postives = 83/98 (84.69%), Query Frame = 0
Query:    2 QVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTK 99
            ++M+ A I +  G V+VEF+E++GTF  PRGRY +E+Y  F+RM G++YDYKI+Y+DI++LFLL KPD+ ++AFVI+LDKPIRQGQQ+YQ LVL+TTK
Sbjct:  219 RIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTK 316          
BLAST of mRNA_Ecto-sp8_S_contig98964.31731.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA)

HSP 1 Score: 130 bits (327), Expect = 5.660e-33
Identity = 61/98 (62.24%), Postives = 83/98 (84.69%), Query Frame = 0
Query:    2 QVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTK 99
            ++M+ ANI    G V+VE  E++GTF  PRGRY++E+Y  F+RM G++YDYKI+Y+DIS+LFLL KPDE ++AFVI+LDKPIRQGQQ+YQ+LV++TTK
Sbjct:  221 RIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTK 318          
BLAST of mRNA_Ecto-sp8_S_contig98964.31731.1 vs. uniprot
Match: A0A1E7FQX7_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQX7_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.320e-32
Identity = 60/98 (61.22%), Postives = 80/98 (81.63%), Query Frame = 0
Query:    2 QVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTK 99
            ++M+ ANI    G V+VEF+  +G+F  PRGRYS+E+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFVI+LDKPIRQGQQ+YQ+LVL+T K
Sbjct:  168 RIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNK 265          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98964.31731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L083_9PHAE8.260e-6098.99FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. ... [more]
D7FLF8_ECTSI1.990e-5898.99FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
A0A836C825_9STRA1.950e-4276.53FACT complex subunit SSRP1 n=1 Tax=Tribonema minus... [more]
A0A7S0C3Q8_9STRA1.250e-3760.61FACT complex subunit SSRP1 (Fragment) n=1 Tax=Prob... [more]
A0A7S2US25_9STRA4.400e-3663.54FACT complex subunit SSRP1 (Fragment) n=1 Tax=Atth... [more]
A0A6U3RIK7_9STRA1.000e-3464.29Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7R9VM85_9STRA1.240e-3462.24FACT complex subunit SSRP1 (Fragment) n=1 Tax=Pseu... [more]
A0A7S2SJ65_9STRA3.920e-3361.22FACT complex subunit SSRP1 (Fragment) n=1 Tax=Euca... [more]
A0A7S4HR37_9STRA5.660e-3362.24Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1E7FQX7_9STRA2.320e-3261.22FACT complex subunit SSRP1 (Fragment) n=1 Tax=Frag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000969Structure-specific recognition proteinPRINTSPR00887SSRCOGNITIONcoord: 74..90
score: 63.97
coord: 29..45
score: 44.12
coord: 51..67
score: 52.21
NoneNo IPR availableGENE3D2.30.29.150coord: 7..106
e-value: 5.1E-36
score: 125.4
NoneNo IPR availablePANTHERPTHR45849FAMILY NOT NAMEDcoord: 2..99
NoneNo IPR availablePANTHERPTHR45849:SF1FACT COMPLEX SUBUNIT SSRP1coord: 2..99
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 26..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98964contigEcto-sp8_S_contig98964:6..530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98964.31731.1mRNA_Ecto-sp8_S_contig98964.31731.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98964 6..530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98964.31731.1 ID=prot_Ecto-sp8_S_contig98964.31731.1|Name=mRNA_Ecto-sp8_S_contig98964.31731.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=107bp
MQVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRY
DYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKV
RRHSAN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000969SSrcognition