prot_Ecto-sp8_S_contig98938.31727.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98938.31727.1
Unique Nameprot_Ecto-sp8_S_contig98938.31727.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length102
Homology
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BLAST of mRNA_Ecto-sp8_S_contig98938.31727.1 vs. uniprot
Match: A0A6H5KFC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC6_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 2.360e-55
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 0 
Query:    1 GLGRVLLSRGEHEEAALVYRVAASAAAAIDSNREHGEAQHGLGLALLATGRREEALVACREAERLDPDLSTATSCVGAILTDAGDIAGALTALRHAAEKAER 102
            GLGRVLLSRGEHEEAALVYRVAASAAAAIDSNREHGEAQHGLGLALLATGR EEAL ACREAERLDPDL TATSC+GAILTDAG+IAGALTALRHAAEKAER
Sbjct:   70 GLGRVLLSRGEHEEAALVYRVAASAAAAIDSNREHGEAQHGLGLALLATGRPEEALAACREAERLDPDLPTATSCIGAILTDAGNIAGALTALRHAAEKAER 171
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BLAST of mRNA_Ecto-sp8_S_contig98938.31727.1 vs. uniprot
Match: D7FQ17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ17_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 1.040e-50
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 0 
Query:    1 GLGRVLLSRGEHEEAALVYRVAASAAAAIDSNREHGEAQHGLGLALLATGRREEALVACREAERLDPDLSTATSCVGAILTDAGDIAGALTALRHAAEKAER 102
            GLGRVLLSRGEHEEAALVYRVAASAAAA+DSNREHGEAQHGLGLALLATGR EEALVACREAERLDPDL TATSC+GAILTDAGDIAGALTALRHAA+K ER
Sbjct:   70 GLGRVLLSRGEHEEAALVYRVAASAAAAVDSNREHGEAQHGLGLALLATGRPEEALVACREAERLDPDLPTATSCIGAILTDAGDIAGALTALRHAADKTER 171
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98938.31727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KFC6_9PHAE2.360e-5595.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ17_ECTSI1.040e-5094.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 36..69
e-value: 0.0064
score: 25.7
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 36..69
score: 8.054
IPR013105Tetratricopeptide repeat 2PFAMPF07719TPR_2coord: 37..68
e-value: 2.8E-5
score: 23.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..102
e-value: 3.2E-14
score: 54.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..99
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..102
score: 13.202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98938contigEcto-sp8_S_contig98938:226..531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98938.31727.1mRNA_Ecto-sp8_S_contig98938.31727.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98938 226..531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98938.31727.1 ID=prot_Ecto-sp8_S_contig98938.31727.1|Name=mRNA_Ecto-sp8_S_contig98938.31727.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=102bp
GLGRVLLSRGEHEEAALVYRVAASAAAAIDSNREHGEAQHGLGLALLATG
RREEALVACREAERLDPDLSTATSCVGAILTDAGDIAGALTALRHAAEKA
ER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR013105TPR_2
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom