prot_Ecto-sp8_S_contig98890.31725.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98890.31725.1
Unique Nameprot_Ecto-sp8_S_contig98890.31725.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length104
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig98890.31725.1 vs. uniprot
Match: A0A6H5KER7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KER7_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.360e-55
Identity = 95/104 (91.35%), Postives = 98/104 (94.23%), Query Frame = 0 
Query:    1 MMTSRQQRCSRRPAACCLILALQGLQGQSFVAPSCFLNAQRTSFTRAAGQQQTPSRAAAARPVSSLNSAPCLAASQEQAKPPGQWSPVRPGGKVPDQHDNDDDE 104
            MM SRQQRCSRRPAACCLI+ALQGLQGQSFVAPSCFLNAQR SFT+AAGQQQT SRAAAARPVSSLNS P LAASQEQAKPPGQWSPVRPGGKVPDQ+DNDD E
Sbjct:    1 MMNSRQQRCSRRPAACCLIVALQGLQGQSFVAPSCFLNAQRASFTQAAGQQQTTSRAAAARPVSSLNSVPFLAASQEQAKPPGQWSPVRPGGKVPDQNDNDDHE 104
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98890.31725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KER7_9PHAE1.360e-5591.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..104
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.551

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98890contigEcto-sp8_S_contig98890:248..559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98890.31725.1mRNA_Ecto-sp8_S_contig98890.31725.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98890 248..559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98890.31725.1 ID=prot_Ecto-sp8_S_contig98890.31725.1|Name=mRNA_Ecto-sp8_S_contig98890.31725.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=104bp
MMTSRQQRCSRRPAACCLILALQGLQGQSFVAPSCFLNAQRTSFTRAAGQ
QQTPSRAAAARPVSSLNSAPCLAASQEQAKPPGQWSPVRPGGKVPDQHDN
DDDE
back to top