prot_Ecto-sp8_S_contig98857.31720.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98857.31720.1
Unique Nameprot_Ecto-sp8_S_contig98857.31720.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length68
Homology
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BLAST of mRNA_Ecto-sp8_S_contig98857.31720.1 vs. uniprot
Match: A0A6H5L0Q2_9PHAE (VASt domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q2_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 6.330e-37
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0 
Query:    1 EFFQLFISNDAEKGIPSFHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISAPIGPNSTRAVKLQR 67
            EFFQLFISNDAEKGIP+FHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISAPIGPNSTRAVKLQR
Sbjct:  462 EFFQLFISNDAEKGIPAFHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISAPIGPNSTRAVKLQR 528
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BLAST of mRNA_Ecto-sp8_S_contig98857.31720.1 vs. uniprot
Match: D7FKF6_ECTSI (VASt domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKF6_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 1.500e-36
Identity = 65/67 (97.01%), Postives = 67/67 (100.00%), Query Frame = 0 
Query:    1 EFFQLFISNDAEKGIPSFHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISAPIGPNSTRAVKLQR 67
            +FFQLFISNDAEKGIP+FHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISAPIGPNSTRAVKLQR
Sbjct:  353 DFFQLFISNDAEKGIPAFHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISAPIGPNSTRAVKLQR 419
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BLAST of mRNA_Ecto-sp8_S_contig98857.31720.1 vs. uniprot
Match: A0A7S4MEH9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MEH9_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 3.310e-6
Identity = 24/68 (35.29%), Postives = 43/68 (63.24%), Query Frame = 0 
Query:    1 EFFQLFISNDAEKGIPSFHQS-MGDSDVKATPWKVAG-GALGMTREIRFVHPISAPIGPNSTRAVKLQ 66
            +F+ LF+SNDA   I ++    +GD+ V+ + W ++   +  +TR +R+VHP++AP+ P +  A K Q
Sbjct:  269 KFYSLFLSNDAVHPIGNYMSDVLGDTRVETSSWSLSEQDSFSLTRTVRYVHPVNAPMAPPAASATKEQ 336
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98857.31720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L0Q2_9PHAE6.330e-3798.51VASt domain-containing protein (Fragment) n=1 Tax=... [more]
D7FKF6_ECTSI1.500e-3697.01VASt domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S4MEH9_9STRA3.310e-635.29Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031968VASt domainPFAMPF16016VAStcoord: 1..67
e-value: 4.4E-10
score: 40.2
IPR031968VASt domainPROSITEPS51778VASTcoord: 1..67
score: 15.23
NoneNo IPR availablePANTHERPTHR47666FAMILY NOT NAMEDcoord: 1..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98857contigEcto-sp8_S_contig98857:193..396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98857.31720.1mRNA_Ecto-sp8_S_contig98857.31720.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98857 193..396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98857.31720.1 ID=prot_Ecto-sp8_S_contig98857.31720.1|Name=mRNA_Ecto-sp8_S_contig98857.31720.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=68bp
EFFQLFISNDAEKGIPSFHQSMGDSDVKATPWKVAGGALGMTREIRFVHP
ISAPIGPNSTRAVKLQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031968VASt