prot_Ecto-sp8_S_contig98856.31719.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98856.31719.1
Unique Nameprot_Ecto-sp8_S_contig98856.31719.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length56
Homology
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: D8LE32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE32_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 2.970e-25
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 0
Query:    1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAKVR 50
            MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAK +
Sbjct: 1929 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAKAQ 1978          
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A6H5J7H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7H9_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.810e-24
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAKVR 50
            MEILYEGRDSRSWIRACCFSPDGK+FAVASTDNKIYIYDSKSY LKAK +
Sbjct:  283 MEILYEGRDSRSWIRACCFSPDGKTFAVASTDNKIYIYDSKSYGLKAKAQ 332          
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A7S3M7D2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7D2_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 5.240e-12
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALK 46
            ++ LYEGRDSR WI    FSP+GKSFAVAS D+KIYIY+ ++Y LK
Sbjct:  150 LKPLYEGRDSRHWIPDVKFSPNGKSFAVASMDHKIYIYNGETYRLK 195          
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A7S2RR50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RR50_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.250e-11
Identity = 26/48 (54.17%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAK 48
            +E+LYEGRD+R W+    F+PDG +FA+AS D KIY+YDS+   ++AK
Sbjct:   48 LEVLYEGRDARHWLHDAKFTPDGSTFALASHDQKIYLYDSRQNIMRAK 95          
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A6U4DXH9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DXH9_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.240e-10
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAK 48
            +E+L+EGRDSR WIR   FSPDG +  +AS+D+ IYIY + S  L+AK
Sbjct:  450 LEVLFEGRDSRHWIRDAKFSPDGSTIVLASSDHNIYIYTTSSLQLRAK 497          
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A2R5G5S9_9STRA (Echinoderm microtubule-associated protein-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5S9_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.710e-10
Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYD-SKSYALKAKVRG 51
            +++L+E RDS+ WI    +SPDG++ AVAS DNKIY+YD +K+Y L+AK  G
Sbjct: 2119 LDLLHETRDSKEWIADAKYSPDGETLAVASYDNKIYMYDVNKNYELRAKCEG 2170          
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A8J2SIX3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIX3_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.530e-9
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAK 48
            + +  EGRDSR WIR   FSP G +FA+ S+D K+YIYDS +  L+A+
Sbjct: 2162 LRVRAEGRDSRHWIRCAAFSPTGDAFALGSSDQKVYIYDSATARLRAR 2209          
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A6S7ZV31_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S7ZV31_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.020e-9
Identity = 26/49 (53.06%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYD-SKSYALKAK 48
            + + +E RDSR WI    FSPDGK+ A+ S DNKIY+YD  K++ L+AK
Sbjct:    3 LSVAHEMRDSREWIAEAKFSPDGKTLAIGSHDNKIYLYDVEKNFILRAK 51          
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A8J8NUU3_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NUU3_HALGN)

HSP 1 Score: 60.1 bits (144), Expect = 3.870e-9
Identity = 24/47 (51.06%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    2 EILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAK 48
            +I++E ++S+ WI A  +SPDGK  AV S DN IY+YD+ SY+L  K
Sbjct:  505 KIIHENKNSKEWIEAIQYSPDGKKLAVGSHDNNIYVYDATSYSLLGK 551          
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A7R9W6B9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6B9_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 8.300e-8
Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYD-SKSYALKAKVRG 51
            +E ++  RD+  WI+   +SPDG   AVAS DNKIY+YD +  +ALKA   G
Sbjct:   23 LESIHSARDTEEWIQDIKWSPDGSKLAVASHDNKIYLYDVAGGFALKATCSG 74          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LE32_ECTSI2.970e-2596.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7H9_9PHAE1.810e-2492.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3M7D2_9STRA5.240e-1265.22Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2RR50_9STRA1.250e-1154.17Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6U4DXH9_9STRA1.240e-1056.25Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A2R5G5S9_9STRA1.710e-1053.85Echinoderm microtubule-associated protein-like 1 n... [more]
A0A8J2SIX3_9STRA1.530e-952.08Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6S7ZV31_9STRA2.020e-953.06Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A8J8NUU3_HALGN3.870e-951.06Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
A0A7R9W6B9_9STRA8.300e-848.08Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 6..39
e-value: 0.0068
score: 25.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..50
e-value: 2.3E-9
score: 38.3
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 10..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98856contigEcto-sp8_S_contig98856:304..471 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98856.31719.1mRNA_Ecto-sp8_S_contig98856.31719.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98856 304..471 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98856.31719.1 ID=prot_Ecto-sp8_S_contig98856.31719.1|Name=mRNA_Ecto-sp8_S_contig98856.31719.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=56bp
MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAKVR
GGGER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf