mRNA_Ecto-sp8_S_contig98856.31719.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: D8LE32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE32_ECTSI) HSP 1 Score: 105 bits (263), Expect = 2.970e-25 Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 1
Query: 1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAKVR 150
MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAK +
Sbjct: 1929 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAKAQ 1978
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A6H5J7H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7H9_9PHAE) HSP 1 Score: 103 bits (256), Expect = 1.810e-24 Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 1
Query: 1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAKVR 150
MEILYEGRDSRSWIRACCFSPDGK+FAVASTDNKIYIYDSKSY LKAK +
Sbjct: 283 MEILYEGRDSRSWIRACCFSPDGKTFAVASTDNKIYIYDSKSYGLKAKAQ 332
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A7S3M7D2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7D2_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 5.240e-12 Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 1
Query: 1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALK 138
++ LYEGRDSR WI FSP+GKSFAVAS D+KIYIY+ ++Y LK
Sbjct: 150 LKPLYEGRDSRHWIPDVKFSPNGKSFAVASMDHKIYIYNGETYRLK 195
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A7S2RR50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RR50_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.250e-11 Identity = 26/48 (54.17%), Postives = 37/48 (77.08%), Query Frame = 1
Query: 1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAK 144
+E+LYEGRD+R W+ F+PDG +FA+AS D KIY+YDS+ ++AK
Sbjct: 48 LEVLYEGRDARHWLHDAKFTPDGSTFALASHDQKIYLYDSRQNIMRAK 95
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A6U4DXH9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DXH9_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.240e-10 Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 1
Query: 1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAK 144
+E+L+EGRDSR WIR FSPDG + +AS+D+ IYIY + S L+AK
Sbjct: 450 LEVLFEGRDSRHWIRDAKFSPDGSTIVLASSDHNIYIYTTSSLQLRAK 497
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A2R5G5S9_9STRA (Echinoderm microtubule-associated protein-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5S9_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.710e-10 Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 1
Query: 1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYD-SKSYALKAKVRG 153
+++L+E RDS+ WI +SPDG++ AVAS DNKIY+YD +K+Y L+AK G
Sbjct: 2119 LDLLHETRDSKEWIADAKYSPDGETLAVASYDNKIYMYDVNKNYELRAKCEG 2170
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A8J2SIX3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIX3_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.530e-9 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAK 144
+ + EGRDSR WIR FSP G +FA+ S+D K+YIYDS + L+A+
Sbjct: 2162 LRVRAEGRDSRHWIRCAAFSPTGDAFALGSSDQKVYIYDSATARLRAR 2209
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A6S7ZV31_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S7ZV31_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.020e-9 Identity = 26/49 (53.06%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYD-SKSYALKAK 144
+ + +E RDSR WI FSPDGK+ A+ S DNKIY+YD K++ L+AK
Sbjct: 3 LSVAHEMRDSREWIAEAKFSPDGKTLAIGSHDNKIYLYDVEKNFILRAK 51
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A8J8NUU3_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NUU3_HALGN) HSP 1 Score: 60.1 bits (144), Expect = 3.870e-9 Identity = 24/47 (51.06%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 4 EILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAK 144
+I++E ++S+ WI A +SPDGK AV S DN IY+YD+ SY+L K
Sbjct: 505 KIIHENKNSKEWIEAIQYSPDGKKLAVGSHDNNIYVYDATSYSLLGK 551
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Match: A0A7R9W6B9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6B9_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 8.300e-8 Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 1
Query: 1 MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYD-SKSYALKAKVRG 153
+E ++ RD+ WI+ +SPDG AVAS DNKIY+YD + +ALKA G
Sbjct: 23 LESIHSARDTEEWIQDIKWSPDGSKLAVASHDNKIYLYDVAGGFALKATCSG 74 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98856.31719.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig98856.31719.1 >prot_Ecto-sp8_S_contig98856.31719.1 ID=prot_Ecto-sp8_S_contig98856.31719.1|Name=mRNA_Ecto-sp8_S_contig98856.31719.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=56bp MEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAKVRback to top mRNA from alignment at Ecto-sp8_S_contig98856:304..471- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig98856.31719.1 ID=mRNA_Ecto-sp8_S_contig98856.31719.1|Name=mRNA_Ecto-sp8_S_contig98856.31719.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=168bp|location=Sequence derived from alignment at Ecto-sp8_S_contig98856:304..471- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig98856:304..471- >mRNA_Ecto-sp8_S_contig98856.31719.1 ID=mRNA_Ecto-sp8_S_contig98856.31719.1|Name=mRNA_Ecto-sp8_S_contig98856.31719.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=168bp|location=Sequence derived from alignment at Ecto-sp8_S_contig98856:304..471- (Ectocarpus species8 EcLAC_412)back to top |