prot_Ecto-sp8_S_contig9885.31718.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9885.31718.1
Unique Nameprot_Ecto-sp8_S_contig9885.31718.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length62
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9885.31718.1 vs. uniprot
Match: D8LGU6_ECTSI (Post-SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU6_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 5.810e-34
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 0 
Query:    1 MEIDMSCPFDCQCGAVRCRGLVSGFSNLSRVEQEEYIDGCATRSPPLTGAVKTWAEEHDIV 61
            MEIDM+CPFDCQCGAVRCRG VSGFSNLSR EQEEYIDG AT SPPLTGAVKTWAEEH IV
Sbjct:   44 MEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAEEHGIV 104
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9885.31718.1 vs. uniprot
Match: D8LGU7_ECTSI (Post-SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU7_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 9.920e-34
Identity = 54/61 (88.52%), Postives = 58/61 (95.08%), Query Frame = 0 
Query:    1 MEIDMSCPFDCQCGAVRCRGLVSGFSNLSRVEQEEYIDGCATRSPPLTGAVKTWAEEHDIV 61
            MEIDMSCPF+CQCGAVRCRGLVSGFSNLSRVEQ+EYI+G ATRSP LTGAVK WAEEH+IV
Sbjct:    1 MEIDMSCPFECQCGAVRCRGLVSGFSNLSRVEQKEYINGGATRSPSLTGAVKMWAEEHNIV 61
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9885.31718.1 vs. uniprot
Match: A0A6H5K6N9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N9_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.020e-31
Identity = 54/60 (90.00%), Postives = 55/60 (91.67%), Query Frame = 0 
Query:    1 MEIDMSCPFDCQCGAVRCRGLVSGFSNLSRVEQEEYIDGCATRSPPLTGAVKTWAEEHDI 60
            MEIDM+CPFDCQCGAVRCRG VSGFSNLSR EQEEYIDG AT SPPLTGAVKTWAEEH I
Sbjct:  203 MEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAEEHGI 262
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9885.31718.1 vs. uniprot
Match: A0A6H5JKC4_9PHAE (Post-SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKC4_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 2.720e-31
Identity = 54/61 (88.52%), Postives = 58/61 (95.08%), Query Frame = 0 
Query:    1 MEIDMSCPFDCQCGAVRCRGLVSGFSNLSRVEQEEYIDGCATRSPPLTGAVKTWAEEHDIV 61
            MEIDMSCPFDCQCGAVRCRG VSGFSNLSR EQ+EYIDG AT+SPPLTGAVKTWA+E+DIV
Sbjct:  296 MEIDMSCPFDCQCGAVRCRGWVSGFSNLSRAEQKEYIDGGATKSPPLTGAVKTWAQENDIV 356
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9885.31718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LGU6_ECTSI5.810e-3490.16Post-SET domain-containing protein n=1 Tax=Ectocar... [more]
D8LGU7_ECTSI9.920e-3488.52Post-SET domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6N9_9PHAE2.020e-3190.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKC4_9PHAE2.720e-3188.52Post-SET domain-containing protein n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003616Post-SET domainPROSITEPS50868POST_SETcoord: 7..23
score: 8.659

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9885contigEcto-sp8_S_contig9885:404..589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9885.31718.1mRNA_Ecto-sp8_S_contig9885.31718.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9885 404..589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9885.31718.1 ID=prot_Ecto-sp8_S_contig9885.31718.1|Name=mRNA_Ecto-sp8_S_contig9885.31718.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=62bp
MEIDMSCPFDCQCGAVRCRGLVSGFSNLSRVEQEEYIDGCATRSPPLTGA
VKTWAEEHDIV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003616Post-SET_dom