prot_Ecto-sp8_S_contig9874.31705.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9874.31705.1
Unique Nameprot_Ecto-sp8_S_contig9874.31705.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length140
Homology
BLAST of mRNA_Ecto-sp8_S_contig9874.31705.1 vs. uniprot
Match: D7FL93_ECTSI (Thioredoxin O n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL93_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 1.040e-91
Identity = 133/139 (95.68%), Postives = 134/139 (96.40%), Query Frame = 0
Query:    1 MLRTAGRAIHQQCRQRVPQASTPLCVRHFSAGGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFNNVFRGGQEIDSMSGADANLLEQNVAKLAEA 139
            MLRTAGRAIHQ CRQRVPQASTP CVRHFSAGGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTF   F+GGQEIDSMSGADANLLEQNVAKLAEA
Sbjct:    1 MLRTAGRAIHQHCRQRVPQASTPPCVRHFSAGGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTF-KFFKGGQEIDSMSGADANLLEQNVAKLAEA 138          
BLAST of mRNA_Ecto-sp8_S_contig9874.31705.1 vs. uniprot
Match: A0A836CF79_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF79_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.260e-28
Identity = 57/116 (49.14%), Postives = 75/116 (64.66%), Query Frame = 0
Query:   24 LCVRHFSA---GGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFNNVFRGGQEIDSMSGADANLLEQNVAKL 136
            + V+H S    G G  + EL++ DDY +  ++K+VLYFTAKWCPPCRRI P   +L+ E   V F KVDID N+ AA+ A I SVPTF   ++ G  +   +GAD  LLE+NV KL
Sbjct:   36 VLVKHLSGAAGGSGGTVKELASMDDYQSSSKDKAVLYFTAKWCPPCRRIAPMYQDLAAEKSDVHFYKVDIDVNKAAAKDAGIMSVPTF-IFYKNGHMVSKFAGADYELLEENVDKL 150          
BLAST of mRNA_Ecto-sp8_S_contig9874.31705.1 vs. uniprot
Match: A0A7S2FY89_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FY89_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.750e-23
Identity = 54/128 (42.19%), Postives = 71/128 (55.47%), Query Frame = 0
Query:   17 VPQASTPLCVRHFSAGGGDRLV--ELSTKDDYVNFPRE-----KSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFNNVFRGGQEIDSMSGADANLLEQNVAKLA 137
            +P+A  P   R     G  R V   L +  ++ +F         SV YFTA WC PC+RI P   ELS+  P ++F KVDID N+ AA  A IKSVPTF   F+ G  +   SGAD  LLE+ ++K+A
Sbjct:    7 IPRALRPALQRASRTAGSTRSVVMTLESATEWESFQSAAMKDTNSVAYFTASWCGPCKRIAPIYEELSDSHPDITFAKVDIDQNQTAASKAAIKSVPTF-MFFKDGNFVGQFSGADHQLLEETLSKMA 133          
BLAST of mRNA_Ecto-sp8_S_contig9874.31705.1 vs. uniprot
Match: A0A7S2UE67_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UE67_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.100e-22
Identity = 56/138 (40.58%), Postives = 74/138 (53.62%), Query Frame = 0
Query:    1 MLRTAGRAIHQQCRQRVPQASTPLCVRHFSAGGGDRLVELSTKDDYVNFP--REKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFNNVFRGGQEIDSMSGADANLLEQNVAKL 136
            M   A  A+ Q  R    + ++    R   A      V LS +D    F     KSVLYFTA WCPPC+ I P   +LSE+   V+FGKVD+D N ++A    ++SVPTF  +F G   +   SGADAN LE+ + KL
Sbjct:    1 MASVARIAMRQMSRSSTSKLASSSLTRRTMAS-----VTLSDEDAVEKFRSLNSKSVLYFTATWCPPCKAIAPIYEKLSEDYSDVAFGKVDVDANSDSALDFEVRSVPTF-VLFDGETAVHKFSGADANQLEEEIKKL 132          
BLAST of mRNA_Ecto-sp8_S_contig9874.31705.1 vs. uniprot
Match: A0A024U468_9STRA (Thioredoxin n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U468_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 4.210e-22
Identity = 55/123 (44.72%), Postives = 74/123 (60.16%), Query Frame = 0
Query:   20 ASTPLCVRHFSAGGGDRLV-ELSTKDDYVNF---PREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFNNVFRGGQEIDSM--SGADANLLEQNVAKL 136
            A++ + +  FS+  G  LV EL+   +Y      P  KSV+YFTA WC PC+ I P  AELS     VSF KVD+D+ +  A +A ++S+PTF   +  GQ   S+  SGAD NLL Q+VAKL
Sbjct:   11 ATSRVSIASFSSRAGASLVKELTEHAEYEQLIARPDAKSVVYFTASWCGPCKMISPVYAELSNMNTDVSFAKVDVDEMDHTAHVAGVRSMPTF-QFYSNGQLQKSLGFSGADPNLLAQSVAKL 132          
BLAST of mRNA_Ecto-sp8_S_contig9874.31705.1 vs. uniprot
Match: A0A7S3P7G5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7G5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 8.420e-22
Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 0
Query:   20 ASTPLCVRH-----FSAGGGDRLVELSTKDDYVNFPRE--KSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFNNVFRGGQEI-DSMSGADANLLEQNVAKL 136
            A+ PL VR      F++    ++  L   +D  NF ++  KSVLYFTA WCPPC++I P   ELS+ T  ++FG VD+DDN +AA    I +VPTF  +F  G+++    SGAD N L Q +  L
Sbjct:   10 AAAPLLVRRTTLRAFASVADHKVKTLEELEDVENFRKQNAKSVLYFTAVWCPPCKQIKPVYHELSKSTEKIAFGLVDVDDNGDAAVEFQISAVPTF--IFSNGEKVLQRFSGADPNQLTQLLKDL 132          
BLAST of mRNA_Ecto-sp8_S_contig9874.31705.1 vs. uniprot
Match: W4H7J0_9STRA (Thioredoxin n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7J0_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.440e-21
Identity = 54/127 (42.52%), Postives = 72/127 (56.69%), Query Frame = 0
Query:   15 QRVPQASTPLCVRHFSAGGGDRLV-ELSTKDDYVNF---PREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFNNVFRGG-QEIDSMSGADANLLEQNVAKL 136
            +R   A++   V  FS+ GG  LV EL+   +Y      P  KSV+YFTA WC PC+ I P  A LS +   +SF KVD+D+ +  A +A ++S+PTF     G  Q+    SGAD  LLE NV KL
Sbjct:   20 RRFAAATSRASVARFSSRGGASLVKELAEHAEYEQLIARPDAKSVVYFTAAWCGPCKMISPIYANLSNKNEDISFVKVDVDELDHTAHVAGVRSMPTFQFYANGKLQQSLGFSGADPTLLESNVNKL 146          
BLAST of mRNA_Ecto-sp8_S_contig9874.31705.1 vs. uniprot
Match: A0A7R9WLB8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WLB8_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 8.130e-21
Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 0
Query:   37 LVELSTKDDYVNFP--REKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFNNVFRGGQEIDSMSGADANLLEQNVAKLAE 138
            ++ LS  D    F   + KSVLYFTA WCPPC+ I     +LS+E   + FGKVD+DDN E A    I  VPTF  +F  G+++   SGAD + L  +VAKL E
Sbjct:   26 VINLSDMDATTKFTDGQSKSVLYFTATWCPPCKMIKEPYEKLSDEFTEIGFGKVDVDDNSETAADYDITGVPTF-ILFNDGEQVGRFSGADIDKLSNSVAKLDE 128          
BLAST of mRNA_Ecto-sp8_S_contig9874.31705.1 vs. uniprot
Match: A0A7S2P9F2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P9F2_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.690e-20
Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = 0
Query:   40 LSTKDDYVNFPR--EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFNNVFRGGQEIDSMSGADANLLEQNVAKL 136
            LS  D    F +  +KSV+YFTA WCPPC+ I P   E+SE+   V+FGKVD+DDN ++A    I +VPTF  +F G    + MSGAD+N LE+ +  L
Sbjct:   71 LSDPDALSKFTQINDKSVVYFTATWCPPCKVISPIYTEMSEKHAGVAFGKVDVDDNSDSAVDFEINAVPTF-VLFNGENVSNRMSGADSNKLEELIEDL 168          
BLAST of mRNA_Ecto-sp8_S_contig9874.31705.1 vs. uniprot
Match: A0A7S2H9R5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H9R5_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.860e-20
Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 0
Query:   38 VELSTKDDYVNFP--REKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFNNVFRGGQEIDSMSGADANLLEQNVAKL 136
            V LS  D    F     KSVLYFTA WCPPC+ I P   E+S   P ++FGKVD+D+N + A    + +VPTF  +F G + I+  SGAD+  LE +V +L
Sbjct:   32 VNLSDADAVEKFRMLNSKSVLYFTATWCPPCKAIAPVYEEISTRYPHIAFGKVDVDENSDVALDFEVNAVPTF-VLFDGEKAIEKFSGADSGKLEHHVMEL 131          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9874.31705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL93_ECTSI1.040e-9195.68Thioredoxin O n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A836CF79_9STRA3.260e-2849.14Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S2FY89_9STRA1.750e-2342.19Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2UE67_9STRA2.100e-2240.58Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A024U468_9STRA4.210e-2244.72Thioredoxin n=1 Tax=Aphanomyces invadans TaxID=157... [more]
A0A7S3P7G5_9STRA8.420e-2242.40Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
W4H7J0_9STRA2.440e-2142.52Thioredoxin n=1 Tax=Aphanomyces astaci TaxID=11209... [more]
A0A7R9WLB8_9STRA8.130e-2146.15Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2P9F2_9STRA1.690e-2047.47Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2H9R5_9STRA1.860e-2045.54Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 45..133
e-value: 4.8E-18
score: 65.1
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 18..138
score: 11.344
NoneNo IPR availableGENE3D3.40.30.10coord: 37..139
e-value: 1.1E-23
score: 85.1
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 38..136
NoneNo IPR availablePANTHERPTHR10438:SF405THIOREDOXIN-3-RELATEDcoord: 38..136
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 55..73
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 35..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9874contigEcto-sp8_S_contig9874:1155..4947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9874.31705.1mRNA_Ecto-sp8_S_contig9874.31705.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9874 1013..6050 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9874.31705.1 ID=prot_Ecto-sp8_S_contig9874.31705.1|Name=mRNA_Ecto-sp8_S_contig9874.31705.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=140bp
MLRTAGRAIHQQCRQRVPQASTPLCVRHFSAGGGDRLVELSTKDDYVNFP
REKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMA
HIKSVPTFNNVFRGGQEIDSMSGADANLLEQNVAKLAEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR036249Thioredoxin-like_sf