prot_Ecto-sp8_S_contig9868.31691.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9868.31691.1
Unique Nameprot_Ecto-sp8_S_contig9868.31691.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length183
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9868.31691.1 vs. uniprot
Match: D8LNX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX8_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 6.420e-51
Identity = 83/94 (88.30%), Postives = 86/94 (91.49%), Query Frame = 0 
Query:    1 AWDEFVYGSHVLFQEGYRRPQQCALDLWQQGGHGGGGSATAGS-VRAPCSDWEGIDAPALCESIGNDSARLGGGGLSDVGRTRALTVLAECFRQ 93
            AWDEFVYGS+VLFQEGYRRPQQCALDL QQGGH GGG+AT G  VR PCSDWEG DAPALCESIGNDSARLGGG LSDVGRTR+LTVLAECFRQ
Sbjct:  129 AWDEFVYGSYVLFQEGYRRPQQCALDLRQQGGHDGGGTATGGPIVRTPCSDWEGTDAPALCESIGNDSARLGGGSLSDVGRTRSLTVLAECFRQ 222
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9868.31691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNX8_ECTSI6.420e-5188.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9868contigEcto-sp8_S_contig9868:4992..6436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9868.31691.1mRNA_Ecto-sp8_S_contig9868.31691.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9868 4655..6436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9868.31691.1 ID=prot_Ecto-sp8_S_contig9868.31691.1|Name=mRNA_Ecto-sp8_S_contig9868.31691.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=183bp
AWDEFVYGSHVLFQEGYRRPQQCALDLWQQGGHGGGGSATAGSVRAPCSD
WEGIDAPALCESIGNDSARLGGGGLSDVGRTRALTVLAECFRQASLPCPV
SLVAQRRLDAASTSAGRELEDALDRAFPLDLSQGTDSTSRETTVSELKDS
LRRVQAARKSVLALAILPASTILDESSGDAFA*
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