prot_Ecto-sp8_S_contig9864.31687.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9864.31687.1
Unique Nameprot_Ecto-sp8_S_contig9864.31687.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length90
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9864.31687.1 vs. uniprot
Match: D7G0F5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0F5_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 4.220e-36
Identity = 70/86 (81.40%), Postives = 71/86 (82.56%), Query Frame = 0 
Query:    1 PLFARVQNSRLCVCLHSCNLTDARHDDREMATDNAVSALGNLLEAQRDTLSNPETGVGGEEAVGRAWGVWLGYMPLRADDEEAEKV 86
            P FA      L V +      DARHDDREMATDNAVSALGNLLEAQRDTLSNPETGVGGEEAVGRAWGVWLGYMPLRADDEEAEKV
Sbjct: 1142 PGFAPFSGQALKVLVEVILRPDARHDDREMATDNAVSALGNLLEAQRDTLSNPETGVGGEEAVGRAWGVWLGYMPLRADDEEAEKV 1227
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BLAST of mRNA_Ecto-sp8_S_contig9864.31687.1 vs. uniprot
Match: I0Z759_COCSC (ARM repeat-containing protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z759_COCSC)

HSP 1 Score: 51.2 bits (121), Expect = 2.060e-5
Identity = 26/65 (40.00%), Postives = 35/65 (53.85%), Query Frame = 0 
Query:   22 DARHDDREMATDNAVSALGNLLEAQRDTLSNPETGVGGEEAVGRAWGVWLGYMPLRADDEEAEKV 86
            D R +D EMAT+NAV+ALG +LE     +           A  ++W VW+  +PLR D  EA  V
Sbjct:  951 DGREEDNEMATENAVAALGKVLEFHGAAIE--------ASAAAQSWDVWISSLPLREDKVEARHV 1007
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9864.31687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0F5_ECTSI4.220e-3681.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
I0Z759_COCSC2.060e-540.00ARM repeat-containing protein n=2 Tax=Coccomyxa Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..87
e-value: 1.5E-9
score: 38.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9864contigEcto-sp8_S_contig9864:6730..6999 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9864.31687.1mRNA_Ecto-sp8_S_contig9864.31687.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9864 6730..6999 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9864.31687.1 ID=prot_Ecto-sp8_S_contig9864.31687.1|Name=mRNA_Ecto-sp8_S_contig9864.31687.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=90bp
PLFARVQNSRLCVCLHSCNLTDARHDDREMATDNAVSALGNLLEAQRDTL
SNPETGVGGEEAVGRAWGVWLGYMPLRADDEEAEKVGVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like