prot_Ecto-sp8_S_contig9860.31680.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9860.31680.1
Unique Nameprot_Ecto-sp8_S_contig9860.31680.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length144
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9860.31680.1 vs. uniprot
Match: D7G0B4_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B4_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 2.100e-58
Identity = 137/143 (95.80%), Postives = 139/143 (97.20%), Query Frame = 0 
Query:    1 MSVAVTMMDTNFSAAFKRSEAYKQLERNVQDEAEELERLRKMNQLPPKNHVPTEPKGFVKVFRRFFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPSATTECTTRMSMKMMSSHSLLPPESGRNAGAGAAVRWDESDLDV 143
            MSVAVTMMDTNFSAAFKRSEAYKQLERNV+DEAEELERLRKMNQLPPKNHVPTEPKG VKVFRRFFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPSATTECTTRMSMKMMSSHSLL PESG +AGAGAAVR DESDLDV
Sbjct:  318 MSVAVTMMDTNFSAAFKRSEAYKQLERNVRDEAEELERLRKMNQLPPKNHVPTEPKGLVKVFRRFFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPSATTECTTRMSMKMMSSHSLLRPESGGHAGAGAAVRGDESDLDV 460
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BLAST of mRNA_Ecto-sp8_S_contig9860.31680.1 vs. uniprot
Match: D7G7J3_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J3_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.680e-11
Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 0 
Query:    1 MSVAVTMMDTNFSAAFKRSEAYKQLERNVQDEAEELERLRKMNQLPPKNHVPTEPKGFVKVFRR 64
            MS  + +MDTNFS  FK++EA+K LE+ V++EAEELE LRKMNQLP   HV  + KG +K  RR
Sbjct:  346 MSAVLKIMDTNFSFEFKKTEAFKNLEQVVKEEAEELELLRKMNQLPEAEHVEPDSKGLLKFIRR 409
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BLAST of mRNA_Ecto-sp8_S_contig9860.31680.1 vs. uniprot
Match: A0A6H5K1F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F7_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 2.780e-8
Identity = 32/44 (72.73%), Postives = 39/44 (88.64%), Query Frame = 0 
Query:    1 MSVAVTMMDTNFSAAFKRSEAYKQLERNVQDEAEELERLRKMNQ 44
            MSV VTMMDTNFS AFKRSEAYK LE++V+DEAEEL+ L+K+ +
Sbjct:  765 MSVVVTMMDTNFSVAFKRSEAYKLLEQHVKDEAEELKILKKVGE 808
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9860.31680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0B4_ECTSI2.100e-5895.80RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G7J3_ECTSI1.680e-1157.81RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K1F7_9PHAE2.780e-872.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9860contigEcto-sp8_S_contig9860:1483..2550 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9860.31680.1mRNA_Ecto-sp8_S_contig9860.31680.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9860 1451..3007 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9860.31680.1 ID=prot_Ecto-sp8_S_contig9860.31680.1|Name=mRNA_Ecto-sp8_S_contig9860.31680.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=144bp
MSVAVTMMDTNFSAAFKRSEAYKQLERNVQDEAEELERLRKMNQLPPKNH
VPTEPKGFVKVFRRFFPPPPSEASLRSGSSRSGGSSVGGREGSTTSSHPS
ATTECTTRMSMKMMSSHSLLPPESGRNAGAGAAVRWDESDLDV*
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