prot_Ecto-sp8_S_contig98554.31676.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98554.31676.1
Unique Nameprot_Ecto-sp8_S_contig98554.31676.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length126
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig98554.31676.1 vs. uniprot
Match: D7G0A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A9_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 2.280e-58
Identity = 110/126 (87.30%), Postives = 113/126 (89.68%), Query Frame = 0 
Query:    1 KSVVPSRVSRNERGGGCRPPGAEAERAMRSRGQTTQRACQPEAKDVARRRSRRALSGGAEKRTALEGRDQRRFRPDVAAGRSDTASATAKRRPAPAIARHSLRNVFLVLFAAMLAAPRINNTSTST 126
            KSVVPS VSRNERG GCRPPGAEAE+AMRSRGQT QRACQ EAKDVARRR RRAL  G EKRTALE RDQRRFRPDVAAGRSDTASATA+RR APAIARHSLRN FLVLFAAMLA PRINN S+ST
Sbjct:   62 KSVVPSTVSRNERGEGCRPPGAEAEQAMRSRGQTNQRACQQEAKDVARRRRRRALPTGGEKRTALEARDQRRFRPDVAAGRSDTASATARRRSAPAIARHSLRNAFLVLFAAMLATPRINNPSSST 187
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98554.31676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0A9_ECTSI2.280e-5887.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..119
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98554contigEcto-sp8_S_contig98554:184..561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98554.31676.1mRNA_Ecto-sp8_S_contig98554.31676.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98554 184..561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98554.31676.1 ID=prot_Ecto-sp8_S_contig98554.31676.1|Name=mRNA_Ecto-sp8_S_contig98554.31676.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=126bp
KSVVPSRVSRNERGGGCRPPGAEAERAMRSRGQTTQRACQPEAKDVARRR
SRRALSGGAEKRTALEGRDQRRFRPDVAAGRSDTASATAKRRPAPAIARH
SLRNVFLVLFAAMLAAPRINNTSTST
back to top