prot_Ecto-sp8_S_contig9847.31663.1 (polypeptide) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9847.31663.1 vs. uniprot
Match: A0A6H5KA31_9PHAE (RNA_pol_sigma70 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KA31_9PHAE) HSP 1 Score: 451 bits (1161), Expect = 3.490e-149 Identity = 309/384 (80.47%), Postives = 312/384 (81.25%), Query Frame = 0
Query: 1 MVLSRRRLTAVCVVGAMCASAPPRTQGFAPPGSFGRAHGAGDSFYCAERRLAATSLGESTSAASTPGRRERRAAAAVSRCSMASSGRKAAARPGVAARSGAXXXXXXATRKRGRDRVPPSSSSAGVAVKDRAATDVGAVDKQSRARGTGSQATAQTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPPSKDVSPSVPAVTVSAASSSSLSSS---DANPLNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYARWWIKKSILTGIANQ 381
MVL RRRLTAVCVVGAMCASAPPRTQGFAPP SFGR HGAGDSF+CAERRLAATSLGESTSAAS PGR XXXXXX RKRGRDRVP SSSSAG AVKDRAATDVGAVDKQ RARG GSQA A T A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VAPPSK+VSPSVPA TVSA DANPLNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYA+WWIKKSILTGIANQ
Sbjct: 1 MVLIRRRLTAVCVVGAMCASAPPRTQGFAPPASFGRTHGAGDSFHCAERRLAATSLGESTSAASAPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRGRDRVPQSSSSAGAAVKDRAATDVGAVDKQLRARGAGSQARAPTVAAMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESKADTAGG-VAPPSKEVSPSVPAKTVSAMXXXXXXXXXXXDANPLNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQ 383
BLAST of mRNA_Ecto-sp8_S_contig9847.31663.1 vs. uniprot
Match: D8LNI6_ECTSI (Chloroplast RNA-polymerase sigma factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI6_ECTSI) HSP 1 Score: 169 bits (427), Expect = 5.010e-43 Identity = 84/144 (58.33%), Postives = 109/144 (75.69%), Query Frame = 0
Query: 238 LNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYARWWIKKSILTGIANQ 381
L Y +T+ K+ LLKP EE+VLGRQIQ+G+ E RD L+ G PS EEWA L + ++EL++EL+ A +AK M++ANLRLVVS+A+ YR + L+F DLIQEGT GLVKA EKF+PE GF+F TYA WWIK+SI+ GIA+Q
Sbjct: 51 LAFYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMRGYEPSEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQ 194
BLAST of mRNA_Ecto-sp8_S_contig9847.31663.1 vs. uniprot
Match: A0A6H5K3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H4_9PHAE) HSP 1 Score: 167 bits (424), Expect = 2.540e-42 Identity = 83/144 (57.64%), Postives = 109/144 (75.69%), Query Frame = 0
Query: 238 LNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYARWWIKKSILTGIANQ 381
L Y +T+ K+ LLKP EE+VLGRQIQ+G+ E RD L+ G P+ EEWA L + ++EL++EL+ A +AK M++ANLRLVVS+A+ YR + L+F DLIQEGT GLVKA EKF+PE GF+F TYA WWIK+SI+ GIA+Q
Sbjct: 181 LAFYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMRGYEPTEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQ 324
BLAST of mRNA_Ecto-sp8_S_contig9847.31663.1 vs. uniprot
Match: A0A7S2WX55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX55_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.850e-37 Identity = 82/164 (50.00%), Postives = 114/164 (69.51%), Query Frame = 0
Query: 218 PAVTVSAASSSSLSSSDANPLNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYARWWIKKSILTGIANQ 381
P+ SAA SSS N L +FK++ + LL+ +EEV+L R++Q + E VRD L+ G P+ EEWAS++ + DEL R+L AK+ MIS+NLRLV+S+A+ Y+ RGLA DLIQEG++GLV+A EKF+PE GF+F TY+ WWIK++IL IA+Q
Sbjct: 146 PSTAASAAGSSS------NELGWFFKSIGQHSLLRAEEEVLLARKVQAMIGWEDVRDGLKDQLGRPPTLEEWASSVGMQPDELRRKLLRGQSAKKAMISSNLRLVISIAKRYQKRGLALTDLIQEGSLGLVRAVEKFDPEKGFKFSTYSTWWIKQAILRAIADQ 303
BLAST of mRNA_Ecto-sp8_S_contig9847.31663.1 vs. uniprot
Match: A0A835ZBY3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY3_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.310e-36 Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 0
Query: 231 SSSDANPLNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYARWWIKKSILTGIANQ 381
SS + L FK + I LLKP+EE+ L RQI+ G++ E R+ L PS EWA+ + + +D L + + AK MISANLRL VS+A+ YR RGLA PDLIQEG+ GL+KA E+F+PE GF+F TYA WWIK+SI+ IA+Q
Sbjct: 10 SSGQPSQLQHLFKRMTSIDLLKPEEEIALARQIKLGIEWEAAREELAMRLERTPSLGEWAAHMGVDEDTLKLIMIRSARAKSTMISANLRLAVSIAKRYRRRGLALPDLIQEGSFGLMKAAERFDPEKGFKFSTYATWWIKQSIMRAIADQ 160
BLAST of mRNA_Ecto-sp8_S_contig9847.31663.1 vs. uniprot
Match: A0A2P7MXF5_9CYAN (RNA polymerase sigma factor SigA n=3 Tax=Cyanobium TaxID=167375 RepID=A0A2P7MXF5_9CYAN) HSP 1 Score: 141 bits (355), Expect = 3.410e-34 Identity = 67/144 (46.53%), Postives = 99/144 (68.75%), Query Frame = 0
Query: 238 LNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYARWWIKKSILTGIANQ 381
+ VY + + +I+LL+PDEE+ L R+I LQLE + + E HG P +EWA+ + + + R L + AKE M+ +NLRLVVS+A+ Y RGL+F DLIQEG++GL++A EKF+ E G++F TYA WWI+++I IA+Q
Sbjct: 145 IRVYLQEIGRIRLLRPDEEIELARKIADLLQLEEIAAQFEADHGRQPDNKEWAALVEMPSIKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQ 288
BLAST of mRNA_Ecto-sp8_S_contig9847.31663.1 vs. uniprot
Match: A0A835ZES3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES3_9STRA) HSP 1 Score: 140 bits (352), Expect = 3.420e-34 Identity = 74/154 (48.05%), Postives = 101/154 (65.58%), Query Frame = 0
Query: 228 SSLSSSDANPLNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYARWWIKKSILTGIANQ 381
S++S A L+ Y + I LLKP+EEV LGR IQ GL+ E ++ L PS EWA+ + + +D L + + AK MISANLRL VS+A+ Y+ RGLA DL+QEG+ GL+KA E+F+P+ GF+F TYA WWIK+SI+ IA+Q
Sbjct: 48 SAVSPVGAGALSWYLSRMSAIDLLKPEEEVTLGRHIQLGLEWEAAKEELAVRLERQPSRAEWAAHMGVDEDTLKLIMIRSSRAKTTMISANLRLAVSIAKRYKHRGLALSDLVQEGSFGLMKAAERFDPDKGFKFSTYATWWIKQSIMRAIADQ 201
BLAST of mRNA_Ecto-sp8_S_contig9847.31663.1 vs. uniprot
Match: A0A4P7ZRF3_9SYNE (RNA polymerase sigma factor SigA n=4 Tax=Synechococcaceae TaxID=1890426 RepID=A0A4P7ZRF3_9SYNE) HSP 1 Score: 141 bits (355), Expect = 4.020e-34 Identity = 68/144 (47.22%), Postives = 100/144 (69.44%), Query Frame = 0
Query: 238 LNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYARWWIKKSILTGIANQ 381
+ VY + + +I+LL+PDEE+ L R+I LQLE + + ET HG P +EWA+ + + + R L + AKE M+ +NLRLVVS+A+ Y RGL+F DLIQEG++GL++A EKF+ E G++F TYA WWI+++I IA+Q
Sbjct: 156 IRVYLQEIGRIRLLRPDEEIELARKIADLLQLEELAAQFETDHGHYPDTKEWAALVDMPLIKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQ 299
BLAST of mRNA_Ecto-sp8_S_contig9847.31663.1 vs. uniprot
Match: Q7VD88_PROMA (RNA polymerase sigma factor SigA n=1 Tax=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) TaxID=167539 RepID=Q7VD88_PROMA) HSP 1 Score: 140 bits (352), Expect = 7.150e-34 Identity = 67/144 (46.53%), Postives = 101/144 (70.14%), Query Frame = 0
Query: 238 LNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYARWWIKKSILTGIANQ 381
+ VY + + +I+LL+PDEE+ L R+I L LE + + E+ HG P+ +EWA+ +++ R L +A AKE M+ +NLRLVVS+A+ Y RGL+F DLIQEG++GL++A EKF+ E G++F TYA WWI+++I IA+Q
Sbjct: 130 IRVYLQEIGRIRLLRPDEEIELARKIADLLHLEELAIQFESEHGNYPTKKEWAALVNMPMARFRRRLMLARRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQ 273
BLAST of mRNA_Ecto-sp8_S_contig9847.31663.1 vs. uniprot
Match: A0A6P1AEV6_9CYAN (RNA polymerase sigma factor SigA n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1AEV6_9CYAN) HSP 1 Score: 138 bits (348), Expect = 9.450e-34 Identity = 67/144 (46.53%), Postives = 100/144 (69.44%), Query Frame = 0
Query: 238 LNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYARWWIKKSILTGIANQ 381
+ VY + + +I+LL+ DEE+ L R+I L+LER+R+RL PS EWAS + + ++ R L + AK+ M+ +NLRLVVS+A+ Y RGL+F DLIQEG++GL++A EKF+ E G++F TYA WWI+++I IA+Q
Sbjct: 71 IRVYLQEIGRIRLLRADEEIELARKIADLLELERIRERLFDRLDREPSDREWASEVEMDLNQFRRRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQ 214 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9847.31663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp8_S_contig9847.31663.1 ID=prot_Ecto-sp8_S_contig9847.31663.1|Name=mRNA_Ecto-sp8_S_contig9847.31663.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=381bpback to top |