prot_Ecto-sp8_S_contig9832.31632.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9832.31632.1
Unique Nameprot_Ecto-sp8_S_contig9832.31632.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length96
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9832.31632.1 vs. uniprot
Match: D7FHP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP0_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 5.950e-40
Identity = 82/92 (89.13%), Postives = 84/92 (91.30%), Query Frame = 0 
Query:    1 SSVGHGRQRGITSSFRRNRFP-ERDLFSKPSYKRSFRSQPHQXXXXXX-QGPISLKGLLDLELVWNRQRGRKGSLRLGEVIEAIAGIDSQVL 90
            SSVG GRQRGITSSF R RFP ERDLFSKPSYKRSFRSQPHQ XXXXX QGP SLKG+LDLEL WNRQRGRKGSLRLGEVIEAIAGIDSQ+L
Sbjct:  107 SSVGRGRQRGITSSFGRTRFPAERDLFSKPSYKRSFRSQPHQHXXXXXXQGPTSLKGVLDLELEWNRQRGRKGSLRLGEVIEAIAGIDSQIL 198
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9832.31632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHP0_ECTSI5.950e-4089.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9832contigEcto-sp8_S_contig9832:2361..3489 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9832.31632.1mRNA_Ecto-sp8_S_contig9832.31632.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9832 2361..3489 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9832.31632.1 ID=prot_Ecto-sp8_S_contig9832.31632.1|Name=mRNA_Ecto-sp8_S_contig9832.31632.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=96bp
SSVGHGRQRGITSSFRRNRFPERDLFSKPSYKRSFRSQPHQHQHQHQQGP
ISLKGLLDLELVWNRQRGRKGSLRLGEVIEAIAGIDSQVLCYVVK*
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