prot_Ecto-sp8_S_contig98202.31612.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98202.31612.1
Unique Nameprot_Ecto-sp8_S_contig98202.31612.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length179
Homology
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BLAST of mRNA_Ecto-sp8_S_contig98202.31612.1 vs. uniprot
Match: A0A1S6GL64_9MAXI (Saposin B-type domain-containing protein n=1 Tax=Pseudodiaptomus poplesia TaxID=213370 RepID=A0A1S6GL64_9MAXI)

HSP 1 Score: 153 bits (386), Expect = 5.380e-44
Identity = 82/181 (45.30%), Postives = 109/181 (60.22%), Query Frame = 0 
Query:    1 MKFLVLLAAIGCASAASSNAVTCDECQAGAAGLVDHLLSDASLAEQGEILKAIVCPQLEDADACMGAIDMWFGDMASCIYNHFVLEGDVCSRLGLCKKAS--IFTPRDWTCEECTDVLARTAAYMADPETIAEGVVYLQGDCFCGADGHSADCGDLVSSVVPLAMPVLAGVLVDQTVELCQ 179
            M FL  + A+ C  A  + AVTCDEC+  A GL DHL +D S+AEQ  IL   VC   +    C   +++++ +MA  +YNHF+     C  L LC K S  ++ PRDW+CE+CTD++ R   YMAD ET+ E V  LQGD FCG   HS DC  +V   V  A+PV+A VL  ++ ELCQ
Sbjct:    1 MLFLFGIFALFCQLA--TGAVTCDECRDAAGGLRDHLQTDESIAEQISILSQTVCVFADIPSECEELLNLYWAEMAGVLYNHFLEPAKSCQLLELCSKKSNKMYLPRDWSCEDCTDIMMRLGIYMADKETVNEAVELLQGDAFCGNGSHSEDCLMMVKDFVTAALPVMAQVLDGKSAELCQ 179
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98202.31612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1S6GL64_9MAXI5.380e-4445.30Saposin B-type domain-containing protein n=1 Tax=P... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..179
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.876
IPR011001Saposin-likeSUPERFAMILY47862Saposincoord: 62..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98202contigEcto-sp8_S_contig98202:28..564 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98202.31612.1mRNA_Ecto-sp8_S_contig98202.31612.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98202 28..564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98202.31612.1 ID=prot_Ecto-sp8_S_contig98202.31612.1|Name=mRNA_Ecto-sp8_S_contig98202.31612.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=179bp
MKFLVLLAAIGCASAASSNAVTCDECQAGAAGLVDHLLSDASLAEQGEIL
KAIVCPQLEDADACMGAIDMWFGDMASCIYNHFVLEGDVCSRLGLCKKAS
IFTPRDWTCEECTDVLARTAAYMADPETIAEGVVYLQGDCFCGADGHSAD
CGDLVSSVVPLAMPVLAGVLVDQTVELCQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011001Saposin-like