prot_Ecto-sp8_S_contig9807.31590.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9807.31590.1
Unique Nameprot_Ecto-sp8_S_contig9807.31590.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length43
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9807.31590.1 vs. uniprot
Match: A0A6H5J7J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J8_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 7.500e-8
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 0 
Query:    7 AVPLLERALSIRMKALGSSHPDTVAIQNKLEQGRK 41
            AVPLLERALSIRMK LG +HPDTV+ QN L+  R+
Sbjct:    7 AVPLLERALSIRMKKLGENHPDTVSTQNSLDVVRR 41
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BLAST of mRNA_Ecto-sp8_S_contig9807.31590.1 vs. uniprot
Match: A0A350X6N5_9CYAN (Kinesin (Fragment) n=1 Tax=Cyanobacteria bacterium UBA11372 TaxID=2055768 RepID=A0A350X6N5_9CYAN)

HSP 1 Score: 46.2 bits (108), Expect = 5.890e-5
Identity = 22/36 (61.11%), Postives = 26/36 (72.22%), Query Frame = 0 
Query:    1 QGKRDQAVPLLERALSIRMKALGSSHPDTVAIQNKL 36
            QGK  +A+PL +RAL+IR KALGS HPD  A  N L
Sbjct:   57 QGKYAEAIPLAQRALAIREKALGSEHPDVAASLNNL 92
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9807.31590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7J8_9PHAE7.500e-871.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A350X6N5_9CYAN5.890e-561.11Kinesin (Fragment) n=1 Tax=Cyanobacteria bacterium... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13374TPR_10coord: 1..28
e-value: 1.5E-6
score: 27.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..42
e-value: 2.3E-9
score: 38.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9807contigEcto-sp8_S_contig9807:5557..5685 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9807.31590.1mRNA_Ecto-sp8_S_contig9807.31590.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9807 5557..5685 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9807.31590.1 ID=prot_Ecto-sp8_S_contig9807.31590.1|Name=mRNA_Ecto-sp8_S_contig9807.31590.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=43bp
QGKRDQAVPLLERALSIRMKALGSSHPDTVAIQNKLEQGRKQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf