prot_Ecto-sp8_S_contig97715.31536.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig97715.31536.1
Unique Nameprot_Ecto-sp8_S_contig97715.31536.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length36
Homology
BLAST of mRNA_Ecto-sp8_S_contig97715.31536.1 vs. uniprot
Match: A0A2T8HPA2_9RHOB (Recombinase family protein n=2 Tax=Pararhodobacter oceanensis TaxID=2172121 RepID=A0A2T8HPA2_9RHOB)

HSP 1 Score: 55.5 bits (132), Expect = 6.760e-8
Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MLNITKPALGAGLDISESSLKLVAGVGFEPTTFRL 35
            +L ITKPA  AGL  SESSLKLVAGVGFEPTTFRL
Sbjct:  485 LLEITKPAGEAGLADSESSLKLVAGVGFEPTTFRL 519          
BLAST of mRNA_Ecto-sp8_S_contig97715.31536.1 vs. uniprot
Match: A0A0P1H2D7_9RHOB (Uncharacterized protein n=1 Tax=Phaeobacter sp. CECT 5382 TaxID=1712645 RepID=A0A0P1H2D7_9RHOB)

HSP 1 Score: 51.6 bits (122), Expect = 2.210e-7
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0
Query:    1 MLNITKPALGAGLDISESSLKLVAGVGFE 29
            MLN+TKPALGAGLDISESSLKLVAG  F+
Sbjct:   19 MLNVTKPALGAGLDISESSLKLVAGARFK 47          
BLAST of mRNA_Ecto-sp8_S_contig97715.31536.1 vs. uniprot
Match: UPI0015830769 (hypothetical protein n=1 Tax=Ruegeria arenilitoris TaxID=1173585 RepID=UPI0015830769)

HSP 1 Score: 49.7 bits (117), Expect = 5.110e-6
Identity = 26/35 (74.29%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    1 MLNITKPALGAGLDISESSLKLVAGVGFEPTTFRL 35
            MLN  KPA  AGL   + SLKLVAGVGFEPTTFRL
Sbjct:  171 MLNKAKPADEAGLVSDDCSLKLVAGVGFEPTTFRL 205          
BLAST of mRNA_Ecto-sp8_S_contig97715.31536.1 vs. uniprot
Match: A0A843YEL9_9RHOB (Uncharacterized protein n=1 Tax=Tritonibacter litoralis TaxID=2662264 RepID=A0A843YEL9_9RHOB)

HSP 1 Score: 47.4 bits (111), Expect = 8.200e-6
Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    1 MLNITKPALGAGLDISESSLKLVAGVGFEPTTFRL 35
            ML  TKPA  AG+  ++SSL LVAGVGFEPTTFRL
Sbjct:   61 MLKQTKPAEEAGIYDAKSSLILVAGVGFEPTTFRL 95          
BLAST of mRNA_Ecto-sp8_S_contig97715.31536.1 vs. uniprot
Match: UPI001A2F91B1 (Recombinase family protein n=1 Tax=Rhodobacteraceae bacterium F11138 TaxID=2794865 RepID=UPI001A2F91B1)

HSP 1 Score: 49.3 bits (116), Expect = 1.010e-5
Identity = 26/35 (74.29%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    1 MLNITKPALGAGLDISESSLKLVAGVGFEPTTFRL 35
            ML   KPA  AGL+ S SSL+LVAGVGFEPTTFRL
Sbjct:  534 MLTKAKPAELAGLEESASSLELVAGVGFEPTTFRL 568          
BLAST of mRNA_Ecto-sp8_S_contig97715.31536.1 vs. uniprot
Match: A0A2S8EPX5_9RHOB (Recombinase family protein n=1 Tax=Rhodobacteraceae bacterium WD3A24 TaxID=2086263 RepID=A0A2S8EPX5_9RHOB)

HSP 1 Score: 48.1 bits (113), Expect = 2.590e-5
Identity = 24/35 (68.57%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    1 MLNITKPALGAGLDISESSLKLVAGVGFEPTTFRL 35
            +L   KPA GAG   +  SLKLVAGVGFEPTTFRL
Sbjct:  536 LLTKAKPACGAGFVANGHSLKLVAGVGFEPTTFRL 570          
BLAST of mRNA_Ecto-sp8_S_contig97715.31536.1 vs. uniprot
Match: A0A4R5VI12_9RHOB (Recombinase family protein n=1 Tax=Antarcticimicrobium luteum TaxID=2547397 RepID=A0A4R5VI12_9RHOB)

HSP 1 Score: 47.0 bits (110), Expect = 6.640e-5
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    1 MLNITKPALGAGLDISESSLKLVAGVGFEPTTFRL 35
            ML   +PA  AGL+ +  SLK+VAGVGFEPTTFRL
Sbjct:  534 MLKQIRPAGEAGLEANSCSLKMVAGVGFEPTTFRL 568          
BLAST of mRNA_Ecto-sp8_S_contig97715.31536.1 vs. uniprot
Match: A3TY86_PSEBH (Site-specific recombinase and resolvase superfamily protein n=1 Tax=Pseudooceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / KCTC 12145 / HTCC2597) TaxID=252305 RepID=A3TY86_PSEBH)

HSP 1 Score: 47.0 bits (110), Expect = 6.670e-5
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    1 MLNITKPALGAGLDISESSLKLVAGVGFEPTTFRL 35
            ML   KPA  AG   ++SSL+LVAGVGFEPTTFRL
Sbjct:  354 MLTKAKPAGEAGFRSNQSSLELVAGVGFEPTTFRL 388          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig97715.31536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2T8HPA2_9RHOB6.760e-882.86Recombinase family protein n=2 Tax=Pararhodobacter... [more]
A0A0P1H2D7_9RHOB2.210e-786.21Uncharacterized protein n=1 Tax=Phaeobacter sp. CE... [more]
UPI00158307695.110e-674.29hypothetical protein n=1 Tax=Ruegeria arenilitoris... [more]
A0A843YEL9_9RHOB8.200e-671.43Uncharacterized protein n=1 Tax=Tritonibacter lito... [more]
UPI001A2F91B11.010e-574.29Recombinase family protein n=1 Tax=Rhodobacteracea... [more]
A0A2S8EPX5_9RHOB2.590e-568.57Recombinase family protein n=1 Tax=Rhodobacteracea... [more]
A0A4R5VI12_9RHOB6.640e-565.71Recombinase family protein n=1 Tax=Antarcticimicro... [more]
A3TY86_PSEBH6.670e-568.57Site-specific recombinase and resolvase superfamil... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig97715contigEcto-sp8_S_contig97715:457..564 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig97715.31536.1mRNA_Ecto-sp8_S_contig97715.31536.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig97715 439..564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig97715.31536.1 ID=prot_Ecto-sp8_S_contig97715.31536.1|Name=mRNA_Ecto-sp8_S_contig97715.31536.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=36bp
MLNITKPALGAGLDISESSLKLVAGVGFEPTTFRL*
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