prot_Ecto-sp8_S_contig9767.31526.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig9767.31526.1
Unique Name	prot_Ecto-sp8_S_contig9767.31526.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	195

Homology

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BLAST of mRNA_Ecto-sp8_S_contig9767.31526.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 1.130e-108
Identity = 188/195 (96.41%), Postives = 192/195 (98.46%), Query Frame = 0

Query:    1 AVWEGARTRGCYEDDPGPKRRMRVYCFRSPAGEAEGWVPTLKRVRKRRSELDGNEEILEEEEDEVQGEDRAAAKEGEXXXXXXXXXXXVLVEEEEHEADMRSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTASQAAKVGIVDSFDVDLNPAQMAAIVQWHKETVGMAALYEIPHQMTQTPLNDPAKSPFR 195
            AVWEGARTRGCYEDDPGPKRRMRVYCFRSPAGEAEGWVPTLKRVRKRRSELDG+E+ILEEEEDEVQGEDRAAAKEG XXXXXXXXXX VLVEEEEHEAD+RSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTA+QAAKVGIVDSFDVDLNP QMAAIVQWHKETVGMAALYEIPHQMTQTPLNDPAKSPFR
Sbjct:  996 AVWEGARTRGCYEDDPGPKRRMRVYCFRSPAGEAEGWVPTLKRVRKRRSELDGSEKILEEEEDEVQGEDRAAAKEGXXXXXXXXXXXEVLVEEEEHEADIRSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTAAQAAKVGIVDSFDVDLNPVQMAAIVQWHKETVGMAALYEIPHQMTQTPLNDPAKSPFR 1190

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BLAST of mRNA_Ecto-sp8_S_contig9767.31526.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 1.480e-76
Identity = 149/195 (76.41%), Postives = 151/195 (77.44%), Query Frame = 0

Query:    1 AVWEGARTRGCYEDDPGPKRRMRVYCFRSPAGEAEGWVPTLKRVRKRRSELDGNEEILEEEEDEVQGEDRAAAKEGEXXXXXXXXXXXVLVEEEEHEADMRSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTASQAAKVGIVDSFDVDLNPAQMAAIVQWHKETVGMAALYEIPHQMTQTPLNDPAKSPFR 195
            AVWEGARTRGCYEDDPGPKRRMRVYCFR+                                          +AKEGEXXXXXXXXXX VLVEEEEHEADMRSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTASQAAKVGIVDSFDVDLNPAQMAAIVQWHKETVGMAALYEIPHQM QTPLNDPAKSPFR
Sbjct:  715 AVWEGARTRGCYEDDPGPKRRMRVYCFRT------------------------------------------SAKEGEXXXXXXXXXXEVLVEEEEHEADMRSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTASQAAKVGIVDSFDVDLNPAQMAAIVQWHKETVGMAALYEIPHQMMQTPLNDPAKSPFR 867

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BLAST of mRNA_Ecto-sp8_S_contig9767.31526.1 vs. uniprot
Match: A0A2S1PRV6_FUCSE (Putative dicer (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRV6_FUCSE)

HSP 1 Score: 206 bits (524), Expect = 4.570e-58
Identity = 114/201 (56.72%), Postives = 137/201 (68.16%), Query Frame = 0

Query:    1 AVWEGA-RTRGCYEDDPGPKRRMRVYCFRSPAGEAEGWVPTLKRVRKRRSELDGNEEILEEEEDEVQGEDRAAAKEGEXXXXXXXXXXXVLVEEE-----EHEADMRSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTASQAAKVGIVDSFDVDLNPAQMAAIVQWHKETVGMAALYEIPHQMTQTPLNDPAKSPFR 195
            A WE A R RGCYE  PGPKRRMRVYCFRSP  E   WVP+    R RR+     +        +V+GED +   +G               EE+     + EA+  +F+PKL VD+G+GPGKGLGPRL+VGLASAAPLPLTA+QA KVGI DSFDVDLNPAQ+A+IVQWH+ET+GM ALY+IPHQ+T+TP  DP K PFR
Sbjct:  347 AAWEDAKRPRGCYEGVPGPKRRMRVYCFRSPPRELNAWVPSSNEPRTRRATAGDYKRSAS---GKVEGEDESGGAKG---VEDDETLKEEPAEEDGGDGGDDEANFPTFNPKLGVDVGQGPGKGLGPRLYVGLASAAPLPLTATQADKVGIEDSFDVDLNPAQLASIVQWHRETLGMVALYKIPHQLTRTPQMDPEKCPFR 541

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig9767.31526.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig9767.31526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5KQM7_9PHAE	1.130e-108	96.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FZW2_ECTSI	1.480e-76	76.41	Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=...	[more]
A0A2S1PRV6_FUCSE	4.570e-58	56.72	Putative dicer (Fragment) n=1 Tax=Fucus serratus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 41..78

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig9767	contig	Ecto-sp8_S_contig9767:37..1518 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig9767.31526.1	mRNA_Ecto-sp8_S_contig9767.31526.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig9767 37..1518 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig9767.31526.1 ID=prot_Ecto-sp8_S_contig9767.31526.1|Name=mRNA_Ecto-sp8_S_contig9767.31526.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=195bp
AVWEGARTRGCYEDDPGPKRRMRVYCFRSPAGEAEGWVPTLKRVRKRRSE
LDGNEEILEEEEDEVQGEDRAAAKEGEEGEEGEEEDEEVLVEEEEHEADM
RSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTASQAAKVGIVDSFD
VDLNPAQMAAIVQWHKETVGMAALYEIPHQMTQTPLNDPAKSPFR