prot_Ecto-sp8_S_contig975.31497.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig975.31497.1
Unique Nameprot_Ecto-sp8_S_contig975.31497.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length445
Homology
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BLAST of mRNA_Ecto-sp8_S_contig975.31497.1 vs. uniprot
Match: A0A6H5JAU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU8_9PHAE)

HSP 1 Score: 568 bits (1465), Expect = 1.860e-195
Identity = 371/450 (82.44%), Postives = 381/450 (84.67%), Query Frame = 0 
Query:    1 MEGAVGSYVGDRELSGGASAMPVKAVTEASAGGGSGFTSCQLSPFLCETFLDGFVVGGEDAEALPATAAAA--APAFSMAASSSPPTFAGGHNVKTERSGRDKQEGDDGLLLARPGSSFSFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAFGGLPDSTATLYPGTPFDPTATGIPIPGIGGLESFSPSGYAAGFGSMSEGNDVGGGG--ILNPFSAASTSPVSFRRSDFGGGG--VLDDKLEFQGGVGMAGVVGETGVGSLKHDEQAFGLDKRLAAFRQQQQQQRMLGQVFHFRPNSAPAEATATSMLSSSSSLFGDADAAHKLRRAAAAISPGVFDMNVDGDGXXXXXXXXXXKGHKQDDVATSSVFGMSSDSDSSSGGDTLSSDGLTDELTGYGSEGWPDDGMENLEQFDVLAVFAFDDHFGIL 444
            MEGAVGSYVGDRELSGGASAMPVKA T+ASAGGGS FTSCQLSPFLCETFLDGFVVGG+D EALPA A     APAFSM A SSPPTFAGGHNVKT+R GRDK E DDGLLLARPGSSFS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       VAAFG LPDSTATLYPGTPFDPTATGIPIPGIGGL SFSPSGYAAGFGS+ EGN VGGGG  ILNPFSAASTSPV FRRSDFGGG   VLDDKLEF  GVGMAG+VGE GVGSLKHDEQAFGLD RLAAFRQQQQQ RMLGQVFHFRP SA                FGD+ AAHKLRRAAAAISPG FDMN+DGDG          KGHKQDDV+TSSVFGM+SDS SSSGGDTLSSDGLTDEL GYGSEGWPDDGMENLEQFDVLA+FAFDDHFGIL
Sbjct:  284 MEGAVGSYVGDRELSGGASAMPVKAATKASAGGGSSFTSCQLSPFLCETFLDGFVVGGDDVEALPAAAXXXXXAPAFSMNALSSPPTFAGGHNVKTKRFGRDKHERDDGLLLARPGSSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA-----VAAFGSLPDSTATLYPGTPFDPTATGIPIPGIGGLGSFSPSGYAAGFGSIREGNGVGGGGGGILNPFSAASTSPVFFRRSDFGGGSGSVLDDKLEFPVGVGMAGIVGEAGVGSLKHDEQAFGLDTRLAAFRQQQQQ-RMLGQVFHFRPKSASXXXXXXXXXXXXXXXFGDSGAAHKLRRAAAAISPGAFDMNMDGDGSSSGGSSGS-KGHKQDDVSTSSVFGMTSDSGSSSGGDTLSSDGLTDELAGYGSEGWPDDGMENLEQFDVLALFAFDDHFGIL 726
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BLAST of mRNA_Ecto-sp8_S_contig975.31497.1 vs. uniprot
Match: D7G4J2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J2_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 4.940e-8
Identity = 37/48 (77.08%), Postives = 40/48 (83.33%), Query Frame = 0 
Query:    1 MEGAVGSYVGDRELSGGASAMPVKAVTEASAGGGSGFTSCQLSPFLCE 48
            ME  VGSY GDRELSGGASAMPVKAVTEASAGGGSGFTS     ++C+
Sbjct:  331 MEEEVGSYFGDRELSGGASAMPVKAVTEASAGGGSGFTS--WGSYVCD 376
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig975.31497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAU8_9PHAE1.860e-19582.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4J2_ECTSI4.940e-877.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..159
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 69..362
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 69..362

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig975contigEcto-sp8_S_contig975:16..1748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig975.31497.1mRNA_Ecto-sp8_S_contig975.31497.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig975 1..1748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig975.31497.1 ID=prot_Ecto-sp8_S_contig975.31497.1|Name=mRNA_Ecto-sp8_S_contig975.31497.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=445bp
MEGAVGSYVGDRELSGGASAMPVKAVTEASAGGGSGFTSCQLSPFLCETF
LDGFVVGGEDAEALPATAAAAAPAFSMAASSSPPTFAGGHNVKTERSGRD
KQEGDDGLLLARPGSSFSFAAAATAAGYNAQQLLHQQQQQQQQQRLQQAQ
QQQQHQQQHRVLLSSGSAAVAAFGGLPDSTATLYPGTPFDPTATGIPIPG
IGGLESFSPSGYAAGFGSMSEGNDVGGGGILNPFSAASTSPVSFRRSDFG
GGGVLDDKLEFQGGVGMAGVVGETGVGSLKHDEQAFGLDKRLAAFRQQQQ
QQRMLGQVFHFRPNSAPAEATATSMLSSSSSLFGDADAAHKLRRAAAAIS
PGVFDMNVDGDGSSSRSSSSSSKGHKQDDVATSSVFGMSSDSDSSSGGDT
LSSDGLTDELTGYGSEGWPDDGMENLEQFDVLAVFAFDDHFGIL*
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