prot_Ecto-sp8_S_contig9735.31469.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9735.31469.1
Unique Nameprot_Ecto-sp8_S_contig9735.31469.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length117
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9735.31469.1 vs. uniprot
Match: A0A6H5JK41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK41_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.730e-23
Identity = 53/86 (61.63%), Postives = 59/86 (68.60%), Query Frame = 0 
Query:   30 YASCEQGKDKSSAHHEISRCLQRTDSREKLINSFVDDAVGNPVSVKLAVVRRIPQSNPGVAIYVDPGVSAVSPGTCDESPWSDQRS 115
            YA CEQGKDKSS HHEIS  LQRTD+RE LI +F D   G P  V+L V  RI  SNPGVA+YV+PGVS + P T D S  S Q S
Sbjct: 1048 YACCEQGKDKSSTHHEISSYLQRTDNRETLIGAFNDGVPGYPAPVRLVVTGRIAASNPGVAVYVEPGVSVICPRTSDPSSSSGQGS 1133
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BLAST of mRNA_Ecto-sp8_S_contig9735.31469.1 vs. uniprot
Match: D7FZ29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ29_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 2.370e-21
Identity = 52/86 (60.47%), Postives = 57/86 (66.28%), Query Frame = 0 
Query:   30 YASCEQGKDKSSAHHEISRCLQRTDSREKLINSFVDDAVGNPVSVKLAVVRRIPQSNPGVAIYVDPGVSAVSPGTCDESPWSDQRS 115
            YA CEQGKDKSSAHHEIS  LQRTD+RE LI +F D   G    V+L V  RI  SNPGVA+ VDPGVS + P T   S  S Q S
Sbjct:  547 YACCEQGKDKSSAHHEISSYLQRTDNRETLIGAFNDGVPGYHAPVRLVVTGRIAASNPGVAVCVDPGVSVICPQTSGPSSLSGQGS 632
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9735.31469.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK41_9PHAE1.730e-2361.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ29_ECTSI2.370e-2160.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9735contigEcto-sp8_S_contig9735:5107..6856 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9735.31469.1mRNA_Ecto-sp8_S_contig9735.31469.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9735 4564..6856 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9735.31469.1 ID=prot_Ecto-sp8_S_contig9735.31469.1|Name=mRNA_Ecto-sp8_S_contig9735.31469.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=117bp
AERLFPRKSSSSVTAPNAHSRSLVPSVLQYASCEQGKDKSSAHHEISRCL
QRTDSREKLINSFVDDAVGNPVSVKLAVVRRIPQSNPGVAIYVDPGVSAV
SPGTCDESPWSDQRSL*
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