prot_Ecto-sp8_S_contig9726.31459.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9726.31459.1
Unique Nameprot_Ecto-sp8_S_contig9726.31459.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length506
Homology
BLAST of mRNA_Ecto-sp8_S_contig9726.31459.1 vs. uniprot
Match: D8LJ93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ93_ECTSI)

HSP 1 Score: 701 bits (1808), Expect = 2.550e-250
Identity = 429/506 (84.78%), Postives = 434/506 (85.77%), Query Frame = 0
Query:    1 MGAAGSVGVVDPAALRKEYEAMAAKDVGDEELLNHMKKLIISPQTGAVDKAKTKEAAPNVEGTRRSSVRRSSAAASEVDSAAAAGPKARRGSGGIAASGVKGGTAGSTARRGXASRPLSHNSRXXXXXXXXXXXXXXXXXXXXX-SSVDGDRPLSAPQTKPPIPKQRPRSSLGEKNDGSGKPTKSRRRSYLGQPTAGQGGNAVGAAAAVAVDAAAAVDGTAPAQDEPVKXXXXQDVEDMKIDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPAHAPPAEGSNPPPEPTMDSITIYSGSKLFWRTGLNVEMFMQQHKTANNVVQAMIFDASTYQELAQVWVCWSAVVANLDAKEMKKEMDAAERAFHNLGMKPTPENVLAEATRKAAVSFIIKRIQVDRDESREEAGGPAVSHKVSMLQMAADEDGMQLLVEKPEGVNDTFSRAMTKRASIQEVAEVMTSLRKSLGDVNTAAQAAAASLVGATGTVEQGRRGSXXXXXRASIQGS 505
            MGAAGSVGVVDP ALRKEYEAMAA+DVGDEELLNHMKKLIISP+T A DK KTKE APNVEGTRRSSVRR+S  A  VDSAA AGPKARRGSGGIAASGV+GG AGSTARRGXASRPLSHNSRXXXXXXXXXXXXXXXXXXXXX SSVDGDRPLSAPQTKPP+PKQRPRSSLGEKNDGSGKPTKSRRRSYLGQPTAGQGG AVGAAAA            APAQDE   XXXX  VEDMKIDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSP HAPPAEGSNPPPEPTMDSITIYSGSKLFWRT LNVEMFMQQHKTANNVVQ                                  MDAAERAFHNLGMKPTPENV AEATRKAAVSFIIKRIQVDRDES EEAGGPAVSHKVSMLQMAADEDGMQLLVEKPEGVNDTFSRAMTKRASIQEVAEVMTSLRKSLGDVNTAAQAAAASLVGATGTVEQGRRGS X   RASIQGS
Sbjct:    1 MGAAGSVGVVDPTALRKEYEAMAAQDVGDEELLNHMKKLIISPKTEAADKPKTKETAPNVEGTRRSSVRRNSGPAPGVDSAAVAGPKARRGSGGIAASGVEGGAAGSTARRGXASRPLSHNSRXXXXXXXXXXXXXXXXXXXXXRSSVDGDRPLSAPQTKPPVPKQRPRSSLGEKNDGSGKPTKSRRRSYLGQPTAGQGGVAVGAAAAXXXXXXXXXXXXAPAQDEXXXXXXXXXVEDMKIDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPVHAPPAEGSNPPPEPTMDSITIYSGSKLFWRTRLNVEMFMQQHKTANNVVQ----------------------------------MDAAERAFHNLGMKPTPENVQAEATRKAAVSFIIKRIQVDRDESPEEAGGPAVSHKVSMLQMAADEDGMQLLVEKPEGVNDTFSRAMTKRASIQEVAEVMTSLRKSLGDVNTAAQAAAASLVGATGTVEQGRRGSVXVARRASIQGS 472          
BLAST of mRNA_Ecto-sp8_S_contig9726.31459.1 vs. uniprot
Match: A0A6H5K5G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G4_9PHAE)

HSP 1 Score: 589 bits (1518), Expect = 2.530e-207
Identity = 348/488 (71.31%), Postives = 361/488 (73.98%), Query Frame = 0
Query:    1 MGAAGSVGVVDPAALRKEYEAMAAKDVGDEELLNHMKKLIISPQTGAVDKAKTKEAAPNVEGTRRSSVRRSSAAASEVDSAAAAGPKARRGSGGIAASGVKGGTAGSTARRGXASRPLSHNSRXXXXXXXXXXXXXXXXXXXXXSSVDGDRPLSAPQTKPPIPKQRPRSSLGEKNDGSGKPTKSRRRSYLGQPTAGQGGNAVGAAAAVAVDAAAAVDGTAPAQDEPVKXXXXQDVEDMKIDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPAHAPPAEGSNPPPEPTMDSITIYSGSKLFWRTGLNVEMFMQQHKTANNVVQAMIFDASTYQELAQVWVCWSAVVANLDAKEMKKEMDAAERAFHNLGMKPTPENVLAEATRKAAVSFIIKRIQVDRDESREEAGGPAVSHKVSMLQMAADEDGMQLLVEKPEGVNDTFSRAMTKRASIQEVAEVMTSLRKSLGDVNTAAQAAAASLVGATGTVEQ 488
            MGAAGSVGVVDPA LRKEYEAMAAK+VGDEELLNHMKKLIISPQ+G                 RR+S                                         ARR                                 SSVD DRPLSAPQTKPP+PKQRPRSSLGE+NDGSGKPTKSRRRSYLGQP    GG+AVGAAAAVAVDA+AAVDG APAQDE   XXXX DV+D+K DSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPAHAPPAEGSNPPPEPTMDSITIYSGSKLFWRT LNVEMFMQQHKTANNVV                WV WSAVVA LDAKEMK EMDAAERAFHNLGMKPTPENV AEATRKAAVSFIIKRIQVDR++S EEAGGPAVSHKVSMLQMAADEDGMQLL+EKPEGVNDTFSRAM+KRASIQEVAEVM SLRKSLGDVNTAAQAAAASL GATGTVEQ
Sbjct:    1 MGAAGSVGVVDPAVLRKEYEAMAAKEVGDEELLNHMKKLIISPQSGQ----------------RRAS----------------------------------------NARR---------------------------------SSVDSDRPLSAPQTKPPVPKQRPRSSLGEENDGSGKPTKSRRRSYLGQP----GGDAVGAAAAVAVDASAAVDGAAPAQDEXXXXXXXXDVQDIKTDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPAHAPPAEGSNPPPEPTMDSITIYSGSKLFWRTRLNVEMFMQQHKTANNVV----------------WVSWSAVVAKLDAKEMKNEMDAAERAFHNLGMKPTPENVQAEATRKAAVSFIIKRIQVDREDSPEEAGGPAVSHKVSMLQMAADEDGMQLLMEKPEGVNDTFSRAMSKRASIQEVAEVMASLRKSLGDVNTAAQAAAASLDGATGTVEQ 379          
BLAST of mRNA_Ecto-sp8_S_contig9726.31459.1 vs. uniprot
Match: A0A7S3H489_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H489_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.380e-11
Identity = 53/186 (28.49%), Postives = 91/186 (48.92%), Query Frame = 0
Query:  240 IDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPAHAPPAEGSNPPPEPTMDSIT---------------------IYSGSKLFWRTGLNVEMFMQQHKTANNVVQAMIFDASTYQELAQVWVCWSAVVANLDAK-----EMKKEMDAAERAFHNLGMKPTPENVLAE-ATRKAAVSFIIKRIQVD 398
            +DSW+SV+ QP C  C M F ++   D+H+K+S  HA   E +        + IT                     +Y+GSK FWRT +N+E+ M  H     V++ + FD     E  ++++ +  + + L+       E  K  + AE+ FH+ G +   E+VL E    +  V++I++R+Q+D
Sbjct:  142 VDSWDSVTHQPFCTTCQMAFKSQDFLDRHVKFSDLHAKNLEKAKGVIAVDKNPITSTDAGVGMVQQSQVEGVHYKLLYTGSKFFWRTQMNIEIDMYLHLLPY-VIEVISFDPIKDHEATRIYLNYYTIQSTLEKLVSSDLEAAKLKELAEQRFHSHGEEA--ESVLREHLLLQRVVTYILQRLQLD 324          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9726.31459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJ93_ECTSI2.550e-25084.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5G4_9PHAE2.530e-20771.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3H489_9STRA1.380e-1128.49Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 345..372

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9726contigEcto-sp8_S_contig9726:1871..7081 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9726.31459.1mRNA_Ecto-sp8_S_contig9726.31459.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9726 1856..7081 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9726.31459.1 ID=prot_Ecto-sp8_S_contig9726.31459.1|Name=mRNA_Ecto-sp8_S_contig9726.31459.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=506bp
MGAAGSVGVVDPAALRKEYEAMAAKDVGDEELLNHMKKLIISPQTGAVDK
AKTKEAAPNVEGTRRSSVRRSSAAASEVDSAAAAGPKARRGSGGIAASGV
KGGTAGSTARRGSASRPLSHNSRLSQSSSSTQASQQRRASNARRSSVDGD
RPLSAPQTKPPIPKQRPRSSLGEKNDGSGKPTKSRRRSYLGQPTAGQGGN
AVGAAAAVAVDAAAAVDGTAPAQDEPVKDEPAQDVEDMKIDSWESVSQQP
SCPLCHMVFSTEGKRDQHIKYSPAHAPPAEGSNPPPEPTMDSITIYSGSK
LFWRTGLNVEMFMQQHKTANNVVQAMIFDASTYQELAQVWVCWSAVVANL
DAKEMKKEMDAAERAFHNLGMKPTPENVLAEATRKAAVSFIIKRIQVDRD
ESREEAGGPAVSHKVSMLQMAADEDGMQLLVEKPEGVNDTFSRAMTKRAS
IQEVAEVMTSLRKSLGDVNTAAQAAAASLVGATGTVEQGRRGSVEVARRA
SIQGS*
back to top