prot_Ecto-sp8_S_contig97248.31457.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig97248.31457.1
Unique Nameprot_Ecto-sp8_S_contig97248.31457.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length45
Homology
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BLAST of mRNA_Ecto-sp8_S_contig97248.31457.1 vs. uniprot
Match: D7FV94_ECTSI (ANAPC4_WD40 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV94_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 3.880e-21
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 
Query:    1 MIRDFSSVVLMDFLGPNELLVLENPWEAVKESLPEVLDRKQYGV 44
            MIRDFSSVVLMDFLGPNELLVLENPWEAVKESLPEVLDRKQYGV
Sbjct:  780 MIRDFSSVVLMDFLGPNELLVLENPWEAVKESLPEVLDRKQYGV 823
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BLAST of mRNA_Ecto-sp8_S_contig97248.31457.1 vs. uniprot
Match: A0A7S3D3N1_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D3N1_9EUKA)

HSP 1 Score: 50.4 bits (119), Expect = 3.260e-6
Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 0 
Query:    2 IRDFSSVVLMDFLGPNELLVLENPWEAVKESLPEVLDRKQYGV 44
            +  +  ++ MD++GP+E++VLE PW  V  SLPE   RK+YG 
Sbjct:  143 VEKYKPLIFMDYVGPDEMMVLERPWLDVISSLPEPFFRKKYGT 185
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig97248.31457.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FV94_ECTSI3.880e-21100.00ANAPC4_WD40 domain-containing protein n=2 Tax=Ecto... [more]
A0A7S3D3N1_9EUKA3.260e-644.19Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig97248contigEcto-sp8_S_contig97248:183..317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig97248.31457.1mRNA_Ecto-sp8_S_contig97248.31457.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig97248 183..326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig97248.31457.1 ID=prot_Ecto-sp8_S_contig97248.31457.1|Name=mRNA_Ecto-sp8_S_contig97248.31457.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=45bp
MIRDFSSVVLMDFLGPNELLVLENPWEAVKESLPEVLDRKQYGV*
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