prot_Ecto-sp8_S_contig97232.31453.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig97232.31453.1
Unique Nameprot_Ecto-sp8_S_contig97232.31453.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length78
Homology
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BLAST of mRNA_Ecto-sp8_S_contig97232.31453.1 vs. uniprot
Match: A0A6H5KD94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD94_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 2.440e-38
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0 
Query:    1 MRTVSWLSESVESSLSAPEDESKRSDTGEEVPRSTTGSPEGASASSATANNDERLRKKAKWKGVTFPILGSDANNLGV 78
            MRTVSWLSESVESSLSAPEDESKRSDT EEVPRSTTGSPEGASASSATA+NDERLRKKAKWKGVTFPILGSDANNLGV
Sbjct: 4471 MRTVSWLSESVESSLSAPEDESKRSDTREEVPRSTTGSPEGASASSATADNDERLRKKAKWKGVTFPILGSDANNLGV 4548
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BLAST of mRNA_Ecto-sp8_S_contig97232.31453.1 vs. uniprot
Match: D7FVC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC4_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 3.910e-27
Identity = 62/78 (79.49%), Postives = 66/78 (84.62%), Query Frame = 0 
Query:    4 VSWLSESVESSLSAPE---DESKRSDTGEEVPRSTTGSPEGASASSATANNDERLRKKAKWKGVTFPILGSDANNLGV 78
            V W    +  SL A +   DESKRSDTGEEVPRSTTGSPEGASASSATA+NDERLRKKAKWKGVTFPILGSDA+NLGV
Sbjct: 4660 VGWAHVDLPVSLRAGDVWKDESKRSDTGEEVPRSTTGSPEGASASSATADNDERLRKKAKWKGVTFPILGSDASNLGV 4737
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig97232.31453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KD94_9PHAE2.440e-3897.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVC4_ECTSI3.910e-2779.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig97232contigEcto-sp8_S_contig97232:299..532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig97232.31453.1mRNA_Ecto-sp8_S_contig97232.31453.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig97232 299..532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig97232.31453.1 ID=prot_Ecto-sp8_S_contig97232.31453.1|Name=mRNA_Ecto-sp8_S_contig97232.31453.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=78bp
MRTVSWLSESVESSLSAPEDESKRSDTGEEVPRSTTGSPEGASASSATAN
NDERLRKKAKWKGVTFPILGSDANNLGV
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