prot_Ecto-sp8_S_contig9696.31408.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9696.31408.1
Unique Nameprot_Ecto-sp8_S_contig9696.31408.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length467
Homology
BLAST of mRNA_Ecto-sp8_S_contig9696.31408.1 vs. uniprot
Match: A0A6H5KJV3_9PHAE (PsbP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJV3_9PHAE)

HSP 1 Score: 712 bits (1837), Expect = 2.530e-253
Identity = 405/476 (85.08%), Postives = 422/476 (88.66%), Query Frame = 0
Query:    1 MVLTKAHVTALAATCSLCSFSQAGAFVQHSHAGAFRAHPSPSAGGFSSLGARARAGQGMISSTVEA-SCSSRSRWFPRTTLGQQQXXXXXXXXXSRSSHVRLGALPEGPGGESTTADEAVESGRTDTERSADDAGSGRTRRAAG--------SVAGGXXXXXXXXAGALDGQFISKLAKRLADSFPLLTTEEIKKEVRALLNPETKGDTPAKQAPGAREDTLAVLAKDVRELVEDLMDQVGVGSGADDKAGLVELKDVAQKFKGVLRGDPAVVQELRRQVLDDLEEVREEIEELLEVKELSKARAKLEKATAESTEMVLDSAAAALAKGIDKVVNEGKDAIPEGEETEKFQVSTYFFGKENELWDDMRANGVTRERFALYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLALRRQRDLEDLRASPAAVARARQRRSSSA 467
            MVLTKA +TALAATCSL SFSQAGAFVQHSH G+FRA+PSPSAGGFS LGARARA QG+ISSTV A SC S SRWFPRTT+ QQQ         SR+SHVRLGALPEG  GE TTA++ +ESGRT+ ERSADDAGSGR               VAG         AG LDGQFISKLAKRL DSFPLLTTEEIKKEVRALLNPETKGDTP+K A GAR+DTLAVLAK+VRELVEDLMDQVGVGSGAD+KAGLVELKDVAQKFKGVLRGDPA VQELRRQVLDDLEEVREEIEELLEVKELSKARAKLEKATAESTEMVLDSAAAALAKGIDKVVNEG+DAIPEGEETEKFQVSTYFFGKENELW+DMRANGVTRERF LYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFYSPEDGYEF+YPDTWVGDSGLALRRQRDLEDLRASPAAVARARQRRSSSA
Sbjct:    1 MVLTKAQITALAATCSLYSFSQAGAFVQHSHTGSFRANPSPSAGGFSPLGARARARQGVISSTVVATSCFSPSRWFPRTTMRQQQQHPRHQRRRSRTSHVRLGALPEGSDGEITTANKGIESGRTEAERSADDAGSGRRXXXXXXXXXXXXXGVAG-------KGAGGLDGQFISKLAKRLTDSFPLLTTEEIKKEVRALLNPETKGDTPSK-ATGARDDTLAVLAKEVRELVEDLMDQVGVGSGADEKAGLVELKDVAQKFKGVLRGDPAAVQELRRQVLDDLEEVREEIEELLEVKELSKARAKLEKATAESTEMVLDSAAAALAKGIDKVVNEGRDAIPEGEETEKFQVSTYFFGKENELWNDMRANGVTRERFVLYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFYSPEDGYEFIYPDTWVGDSGLALRRQRDLEDLRASPAAVARARQRRSSSA 468          
BLAST of mRNA_Ecto-sp8_S_contig9696.31408.1 vs. uniprot
Match: D8LPY6_ECTSI (PsbP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY6_ECTSI)

HSP 1 Score: 578 bits (1490), Expect = 5.750e-202
Identity = 321/332 (96.69%), Postives = 321/332 (96.69%), Query Frame = 0
Query:  136 GRTRRAAGSVAGGXXXXXXXXAGALDGQFISKLAKRLADSFPLLTTEEIKKEVRALLNPETKGDTPAKQAPGAREDTLAVLAKDVRELVEDLMDQVGVGSGADDKAGLVELKDVAQKFKGVLRGDPAVVQELRRQVLDDLEEVREEIEELLEVKELSKARAKLEKATAESTEMVLDSAAAALAKGIDKVVNEGKDAIPEGEETEKFQVSTYFFGKENELWDDMRANGVTRERFALYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLALRRQRDLEDLRASPAAVARARQRRSSSA 467
            GRTRRAAGSVAGG        AGALDGQFISKLAKRLADSFPLLTTEEIKKEVRALLNPETKGDTPAK APGAREDTLAVLAKDVRELVEDLMDQVGVGSGADDKAGLVELKDVAQKFKGVLRGDPAVVQELRRQVLDDLEEVREEIEELLEVKELSKARAKLEKATAESTEMVLDSAAAALAKGIDKVVNEGKDAIPEGEETEKFQVSTYFFGKENELWDDMRANGVTRERF  YSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLALRRQRDLEDLRASPAAVARARQRRSSSA
Sbjct:   44 GRTRRAAGSVAGGGGAGKG--AGALDGQFISKLAKRLADSFPLLTTEEIKKEVRALLNPETKGDTPAK-APGAREDTLAVLAKDVRELVEDLMDQVGVGSGADDKAGLVELKDVAQKFKGVLRGDPAVVQELRRQVLDDLEEVREEIEELLEVKELSKARAKLEKATAESTEMVLDSAAAALAKGIDKVVNEGKDAIPEGEETEKFQVSTYFFGKENELWDDMRANGVTRERFVRYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLALRRQRDLEDLRASPAAVARARQRRSSSA 372          
BLAST of mRNA_Ecto-sp8_S_contig9696.31408.1 vs. uniprot
Match: A0A835YU89_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU89_9STRA)

HSP 1 Score: 108 bits (269), Expect = 8.450e-22
Identity = 55/103 (53.40%), Postives = 72/103 (69.90%), Query Frame = 0
Query:  339 EKFQVSTYFFGKENELWDDMRANGVTRERFALYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFY------SPEDGYEFMYPDTWVGD 435
            E F V+TYFFGK+NE W+DM+ NGV   RF LY+ L  AVA+GGNLFGVTSALLG+ AP+ +   ++D+L+P+ GFKR        S   G+EF+YP  W+ D
Sbjct:   76 ESFSVTTYFFGKDNEFWEDMQRNGVQPRRFFLYTGLSAAVAVGGNLFGVTSALLGA-APKLAERSQLDVLYPVKGFKRCVNKGESESESHGFEFVYPHEWLAD 177          
BLAST of mRNA_Ecto-sp8_S_contig9696.31408.1 vs. uniprot
Match: A0A4D9CU31_9STRA (PsbP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU31_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.780e-16
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 0
Query:  346 YFFGKENELWDDMRANGVTRERFALYSLLGGAVALGGNLFGVTSALLGSVA-PEASRDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLAL 440
            YFFG   E  +D+   G++R+R  L + +   +ALG N  GVTSALL + + PE   DL++D+L+P+ GFKRF   +DGYEF YP +W+ D  + L
Sbjct:    3 YFFGTAGEFDEDLAYLGISRQRLLLNAGVATTLALGANFVGVTSALLNTFSTPETMSDLKLDVLYPVRGFKRFVDTDDGYEFRYPQSWLSDQAVLL 98          
BLAST of mRNA_Ecto-sp8_S_contig9696.31408.1 vs. uniprot
Match: K8YRA7_NANGC (PsbP domain-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YRA7_NANGC)

HSP 1 Score: 89.0 bits (219), Expect = 1.240e-15
Identity = 43/96 (44.79%), Postives = 61/96 (63.54%), Query Frame = 0
Query:  346 YFFGKENELWDDMRANGVTRERFALYSLLGGAVALGGNLFGVTSALLGSVA-PEASRDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLAL 440
            YFFG   E  +D+   G++R+R  L + +   +ALG N  GVTSALL + + PE   D ++D+L+P+ GFKRF   EDGYEF YP +W+ D  + L
Sbjct:  104 YFFGTAGEFDEDLAYLGISRQRLLLNAGVATTLALGANFVGVTSALLNTFSTPETMSDWKLDVLYPVRGFKRFVDTEDGYEFRYPQSWLSDQAILL 199          
BLAST of mRNA_Ecto-sp8_S_contig9696.31408.1 vs. uniprot
Match: A0A8J5XA94_DIALT (PsbP domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XA94_DIALT)

HSP 1 Score: 83.6 bits (205), Expect = 2.640e-14
Identity = 43/87 (49.43%), Postives = 61/87 (70.11%), Query Frame = 0
Query:  364 TRERFALYSL--LGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLALRRQRDLED 448
            T  R AL S   LG AVALGG+LFGVT A+L S+AP+ASR  R+D+L+P+GGF+R+ + +  +EF+YP  W+ D  L+L +   + D
Sbjct:   32 TASRRALVSTVPLGLAVALGGDLFGVTQAVL-SIAPDASRTYRLDVLYPVGGFRRYLASDGAFEFVYPKAWLADQALSLPKAGQVRD 117          
BLAST of mRNA_Ecto-sp8_S_contig9696.31408.1 vs. uniprot
Match: UPI000D15265E (psbP domain-containing protein 7, chloroplastic-like isoform X2 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=UPI000D15265E)

HSP 1 Score: 80.5 bits (197), Expect = 5.960e-14
Identity = 42/82 (51.22%), Postives = 54/82 (65.85%), Query Frame = 0
Query:  360 ANGVTRERFALYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLALR 441
            A  V R RF L ++ G A+ALG +  G TSA+L S+ PE  R LRVD+L+PIGG+KR      G+EF++P TWVGD  L  R
Sbjct:   63 APSVFRRRFILGTITGTALALGADFLGSTSAIL-SLNPELFRGLRVDVLYPIGGYKRCLETSQGFEFIFPKTWVGDQTLLYR 143          
BLAST of mRNA_Ecto-sp8_S_contig9696.31408.1 vs. uniprot
Match: A0A7I4D1L6_PHYPA (PsbP domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4D1L6_PHYPA)

HSP 1 Score: 81.6 bits (200), Expect = 7.470e-14
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0
Query:  358 MRANGVTRERFALYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLALR 441
            M A  V R RF L ++ G A+ALG +  G TSA+L S+ PE  R LRVD+L+PIGG+KR      G+EF++P TWVGD  L  R
Sbjct:    8 MLAPSVFRRRFILGTITGTALALGADFLGSTSAIL-SLNPELFRGLRVDVLYPIGGYKRCLETSQGFEFIFPKTWVGDQTLLYR 90          
BLAST of mRNA_Ecto-sp8_S_contig9696.31408.1 vs. uniprot
Match: A0A7S3ENR3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENR3_9RHOD)

HSP 1 Score: 83.6 bits (205), Expect = 8.580e-14
Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 0
Query:  339 EKFQVSTYFFGKENELWDDMRANGVTRERFALYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLAL 440
            EK  + T+ FGKE E   D+   G  R RF     L  A+ LGGNL G TSA+L S+    SR L++D+++P+GGFKR+ S  D YEF+YP  WV D  +AL
Sbjct:  123 EKTDLRTFLFGKEGEFDRDLGVLGSDRRRFFTGLGLSTALVLGGNLLGSTSAVL-SMNANTSRALKLDVVYPVGGFKRYISKGD-YEFIYPGDWVEDYAVAL 222          
BLAST of mRNA_Ecto-sp8_S_contig9696.31408.1 vs. uniprot
Match: A0A1Y1I0H8_KLENI (PsbP family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I0H8_KLENI)

HSP 1 Score: 77.4 bits (189), Expect = 2.090e-12
Identity = 41/78 (52.56%), Postives = 50/78 (64.10%), Query Frame = 0
Query:  364 TRERFALYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLALR 441
            +R R     + G AV LGGNL GVTS LLG + PEASR L++D LFP+ GFKR      G+EF+YP  W+GD  L  R
Sbjct:    8 SRRRLFYSGVTGLAVTLGGNLGGVTSGLLG-LNPEASRQLKLDTLFPVKGFKRCIESGQGFEFIYPAEWLGDQRLLYR 84          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9696.31408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJV3_9PHAE2.530e-25385.08PsbP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LPY6_ECTSI5.750e-20296.69PsbP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YU89_9STRA8.450e-2253.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CU31_9STRA1.780e-1644.79PsbP domain-containing protein n=1 Tax=Nannochloro... [more]
K8YRA7_NANGC1.240e-1544.79PsbP domain-containing protein n=2 Tax=Nannochloro... [more]
A0A8J5XA94_DIALT2.640e-1449.43PsbP domain-containing protein n=3 Tax=Diacronema ... [more]
UPI000D15265E5.960e-1451.22psbP domain-containing protein 7, chloroplastic-li... [more]
A0A7I4D1L6_PHYPA7.470e-1451.19PsbP domain-containing protein n=2 Tax=Physcomitri... [more]
A0A7S3ENR3_9RHOD8.580e-1447.06Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1Y1I0H8_KLENI2.090e-1252.56PsbP family protein n=1 Tax=Klebsormidium nitens T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 264..299
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 363..454
NoneNo IPR availablePANTHERPTHR31407:SF16PSBP DOMAIN-CONTAINING PROTEIN 7, CHLOROPLASTICcoord: 363..454
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 368..392
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 393..467
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.452

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9696contigEcto-sp8_S_contig9696:1858..7134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9696.31408.1mRNA_Ecto-sp8_S_contig9696.31408.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9696 1688..7134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9696.31408.1 ID=prot_Ecto-sp8_S_contig9696.31408.1|Name=mRNA_Ecto-sp8_S_contig9696.31408.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=467bp
MVLTKAHVTALAATCSLCSFSQAGAFVQHSHAGAFRAHPSPSAGGFSSLG
ARARAGQGMISSTVEASCSSRSRWFPRTTLGQQQQHHRHQRRRSRSSHVR
LGALPEGPGGESTTADEAVESGRTDTERSADDAGSGRTRRAAGSVAGGGG
GGAGKGAGALDGQFISKLAKRLADSFPLLTTEEIKKEVRALLNPETKGDT
PAKQAPGAREDTLAVLAKDVRELVEDLMDQVGVGSGADDKAGLVELKDVA
QKFKGVLRGDPAVVQELRRQVLDDLEEVREEIEELLEVKELSKARAKLEK
ATAESTEMVLDSAAAALAKGIDKVVNEGKDAIPEGEETEKFQVSTYFFGK
ENELWDDMRANGVTRERFALYSLLGGAVALGGNLFGVTSALLGSVAPEAS
RDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLALRRQRDLEDLR
ASPAAVARARQRRSSSA
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