prot_Ecto-sp8_S_contig96927.31402.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig96927.31402.1
Unique Nameprot_Ecto-sp8_S_contig96927.31402.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length88
Homology
BLAST of mRNA_Ecto-sp8_S_contig96927.31402.1 vs. uniprot
Match: UPI0014926A20 (HNH endonuclease n=1 Tax=Ruegeria sp. HKCCD6228 TaxID=2683001 RepID=UPI0014926A20)

HSP 1 Score: 94.0 bits (232), Expect = 9.940e-23
Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    5 RPNLSPAVQQRKRWYGTRRWRKLRAQVLAGNPLCAICWKVPATQADHIQHTDDNAHFWNPNNLRPACAECNNRL 78
            R +  P V QRKRWYGT RW++LRA+VLA  P C++C  V A   DHI+H  DN+ FW+ +NLRP C  CN++L
Sbjct:    5 RKSRRPEVAQRKRWYGTARWKRLRARVLANGPTCSVCHAVAADSVDHIEHRPDNSTFWDADNLRPVCKPCNSKL 78          
BLAST of mRNA_Ecto-sp8_S_contig96927.31402.1 vs. uniprot
Match: UPI000DA155E0 (HNH endonuclease n=1 Tax=Salinicola peritrichatus TaxID=1267424 RepID=UPI000DA155E0)

HSP 1 Score: 55.1 bits (131), Expect = 8.500e-8
Identity = 34/79 (43.04%), Postives = 44/79 (55.70%), Query Frame = 0
Query:    8 LSPAVQQRKRWYGTRRWRKLRAQVLAGNPLCAICWKV----PATQADHIQ-----HTDDNAHFWNPNNLRPACAECNNR 77
            + P  +QR+    +  WRKLRAQVLA  PLC  C  +    PAT  DHI      +TDDN+      NL+P C EC++R
Sbjct:    1 MRPVKKQRRVPLSSAAWRKLRAQVLAEEPLCRQCVALGIVTPATDVDHIDNAEGDYTDDNSR----ENLQPLCHECHSR 75          
BLAST of mRNA_Ecto-sp8_S_contig96927.31402.1 vs. uniprot
Match: UPI0012FF788B (HNH endonuclease n=1 Tax=Acidovorax carolinensis TaxID=553814 RepID=UPI0012FF788B)

HSP 1 Score: 55.5 bits (132), Expect = 1.340e-7
Identity = 31/67 (46.27%), Postives = 38/67 (56.72%), Query Frame = 0
Query:   24 WRKLRAQVLAGNPLCAICWK----VPATQADHIQHTDDNAHFWNPNNLRPACAECNNRLGATDAAKR 86
            W+KLRA VLAG PLC  C      VPAT  DH+   DDN       +L+P C EC++R  A +  KR
Sbjct:   30 WQKLRASVLAGEPLCRHCAARGLVVPATDVDHMNGADDNRL----ESLQPLCHECHSRKTAAEHGKR 92          
BLAST of mRNA_Ecto-sp8_S_contig96927.31402.1 vs. uniprot
Match: UPI00053DE85F (HNH endonuclease n=3 Tax=Pseudomonas aeruginosa TaxID=287 RepID=UPI00053DE85F)

HSP 1 Score: 54.7 bits (130), Expect = 1.480e-7
Identity = 31/72 (43.06%), Postives = 42/72 (58.33%), Query Frame = 0
Query:   24 WRKLRAQVLAGNPLCAICWK----VPATQADHIQ-----HTDDNAHFWNPNNLRPACAECNNRLGATDAAKR 86
            W++LRA+VLA  PLC +C      VPAT  DHI+     ++DDN+      NL+P C EC++   A D  KR
Sbjct:   14 WKRLRAEVLADEPLCRMCAARGLVVPATDVDHIEDSRDDYSDDNSRA----NLQPLCHECHSLKTARDMGKR 81          
BLAST of mRNA_Ecto-sp8_S_contig96927.31402.1 vs. uniprot
Match: A0A3M0WSB7_9BACT (HNH endonuclease n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=A0A3M0WSB7_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 1.740e-7
Identity = 24/74 (32.43%), Postives = 42/74 (56.76%), Query Frame = 0
Query:   14 QRKRWYGTRRWRKLRAQVLAGNPLCAICWKVPATQADHIQHTDDNAHFWNPNNLRPACAECNNRLGATDAAKRR 87
            ++K++Y +  W+KLR  +LA +P C +C  + AT+ DHI   +D    ++  NL+P C  C++     +   RR
Sbjct:   51 EKKKFYNSAAWKKLRKHILATHPFCKVCGAI-ATEVDHIVAIEDGGELYSYENLQPLCKSCHSTKTGKEVYNRR 123          
BLAST of mRNA_Ecto-sp8_S_contig96927.31402.1 vs. uniprot
Match: UPI000A0780F1 (HNH endonuclease n=1 Tax=Simplicispira psychrophila TaxID=80882 RepID=UPI000A0780F1)

HSP 1 Score: 54.3 bits (129), Expect = 3.730e-7
Identity = 30/66 (45.45%), Postives = 37/66 (56.06%), Query Frame = 0
Query:   24 WRKLRAQVLAGNPLCAICWK----VPATQADHIQHTDDNAHFWNPNNLRPACAECNNRLGATDAAK 85
            W+KLRA VLAG PLC  C      V AT  DH+   DDN     P +L+P C EC++R  A +  K
Sbjct:   30 WQKLRASVLAGEPLCRHCTARGLTVIATDVDHMNGADDNR----PESLQPLCHECHSRKTAKEQGK 91          
BLAST of mRNA_Ecto-sp8_S_contig96927.31402.1 vs. uniprot
Match: UPI0019523B37 (HNH endonuclease n=1 Tax=Acidovorax carolinensis TaxID=553814 RepID=UPI0019523B37)

HSP 1 Score: 53.5 bits (127), Expect = 6.880e-7
Identity = 30/66 (45.45%), Postives = 37/66 (56.06%), Query Frame = 0
Query:   24 WRKLRAQVLAGNPLCAICWK----VPATQADHIQHTDDNAHFWNPNNLRPACAECNNRLGATDAAK 85
            W+KLRA VLAG PLC  C      VPAT  DH+   DDN       +L+P C EC++R  A +  K
Sbjct:   26 WQKLRASVLAGEPLCRHCAARGLVVPATDVDHMNGADDNRL----ESLQPLCHECHSRKTAMENGK 87          
BLAST of mRNA_Ecto-sp8_S_contig96927.31402.1 vs. uniprot
Match: A0A2T0VL88_9GAMM (HNH endonuclease n=1 Tax=Halomonas ventosae TaxID=229007 RepID=A0A2T0VL88_9GAMM)

HSP 1 Score: 52.4 bits (124), Expect = 8.750e-7
Identity = 29/63 (46.03%), Postives = 36/63 (57.14%), Query Frame = 0
Query:   24 WRKLRAQVLAGNPLCAIC----WKVPATQADHI-----QHTDDNAHFWNPNNLRPACAECNNR 77
            W KLRAQVLA  PLC +C    +  PAT  DH+      +TDDN       NL+P C EC++R
Sbjct:   14 WLKLRAQVLAEEPLCRMCAAAGYTTPATDVDHVTNGDGDYTDDNRR----ENLQPLCHECHSR 72          
BLAST of mRNA_Ecto-sp8_S_contig96927.31402.1 vs. uniprot
Match: UPI0019BDF722 (Uncharacterized protein n=1 Tax=Streptomyces finlayi TaxID=67296 RepID=UPI0019BDF722)

HSP 1 Score: 51.6 bits (122), Expect = 1.030e-6
Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 0
Query:   24 WRKLRAQVLAGNPLCAICWKVPATQADHI---QHTDDNAHFWNPNNLRPACAECN 75
            WR++RA VLA  PLC  C + PAT ADHI   +H  D+     P+NL+P CA CN
Sbjct:   18 WRRVRAAVLAAEPLCRTCGE-PATTADHIVPRKHGGDDR----PDNLQPLCAPCN 67          
BLAST of mRNA_Ecto-sp8_S_contig96927.31402.1 vs. uniprot
Match: UPI0004CA5947 (HNH endonuclease n=3 Tax=unclassified Streptomyces TaxID=2593676 RepID=UPI0004CA5947)

HSP 1 Score: 52.0 bits (123), Expect = 1.090e-6
Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 0
Query:   17 RWYGTRR-------WRKLRAQVLAGNPLCAICWKVPATQADHIQ-HTDDNAHFWNPNNLRPACAECNNRLGATD 82
            RW G+ R       W+K+RA+VLA +P+C +C   P+T  DHI+  TDD+        LR  CAEC+ R  + +
Sbjct:    4 RWAGSDRVRRLPPGWKKIRARVLARDPICVLCGVRPSTHCDHIKAKTDDHRETA----LRGVCAECHGRKSSAE 73          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig96927.31402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0014926A209.940e-2354.05HNH endonuclease n=1 Tax=Ruegeria sp. HKCCD6228 Ta... [more]
UPI000DA155E08.500e-843.04HNH endonuclease n=1 Tax=Salinicola peritrichatus ... [more]
UPI0012FF788B1.340e-746.27HNH endonuclease n=1 Tax=Acidovorax carolinensis T... [more]
UPI00053DE85F1.480e-743.06HNH endonuclease n=3 Tax=Pseudomonas aeruginosa Ta... [more]
A0A3M0WSB7_9BACT1.740e-732.43HNH endonuclease n=1 Tax=Candidatus Parcubacteria ... [more]
UPI000A0780F13.730e-745.45HNH endonuclease n=1 Tax=Simplicispira psychrophil... [more]
UPI0019523B376.880e-745.45HNH endonuclease n=1 Tax=Acidovorax carolinensis T... [more]
A0A2T0VL88_9GAMM8.750e-746.03HNH endonuclease n=1 Tax=Halomonas ventosae TaxID=... [more]
UPI0019BDF7221.030e-650.91Uncharacterized protein n=1 Tax=Streptomyces finla... [more]
UPI0004CA59471.090e-639.19HNH endonuclease n=3 Tax=unclassified Streptomyces... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003615HNH nucleaseSMARTSM00507HNH_5coord: 26..76
e-value: 2.5E-5
score: 33.7
IPR002711HNH endonucleasePFAMPF01844HNHcoord: 38..80
e-value: 1.6E-5
score: 25.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig96927contigEcto-sp8_S_contig96927:183..446 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig96927.31402.1mRNA_Ecto-sp8_S_contig96927.31402.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig96927 183..449 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig96927.31402.1 ID=prot_Ecto-sp8_S_contig96927.31402.1|Name=mRNA_Ecto-sp8_S_contig96927.31402.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=88bp
MKRKRPNLSPAVQQRKRWYGTRRWRKLRAQVLAGNPLCAICWKVPATQAD
HIQHTDDNAHFWNPNNLRPACAECNNRLGATDAAKRRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003615HNH_nuc
IPR002711HNH