prot_Ecto-sp8_S_contig9681.31387.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9681.31387.1
Unique Nameprot_Ecto-sp8_S_contig9681.31387.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length172
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9681.31387.1 vs. uniprot
Match: A0A6H5L8S1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8S1_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 2.320e-50
Identity = 104/171 (60.82%), Postives = 105/171 (61.40%), Query Frame = 0 
Query:    1 MGAGGGALAVPIGTQEVSGEDLSKVVDAKIKLEGNDGRDGSGANRKRSRPQGSVSPSPNEPGFRDSDAAGGDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPADSRPTQTTFAWTDMLVDDDNSDDLDGMR 171
            MGAGGGALAVP+GTQEVSGEDLSKVVDAKIKLEGNDGRDGSGANRKRSRPQGSVSPSPNEPGFRD DAAGGDSG                                                                 AVPADSRPTQTTFAWTDMLVDDDNSDDLDGMR
Sbjct:  228 MGAGGGALAVPLGTQEVSGEDLSKVVDAKIKLEGNDGRDGSGANRKRSRPQGSVSPSPNEPGFRDPDAAGGDSGSGGRSGGAREAAMYLGSDDDEGIDEHRTLAKSRRRRVRKKPAASTAIAEGGRGGDGNHGSREAAAAVPADSRPTQTTFAWTDMLVDDDNSDDLDGMR 398
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BLAST of mRNA_Ecto-sp8_S_contig9681.31387.1 vs. uniprot
Match: D7FIW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIW2_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.420e-44
Identity = 164/171 (95.91%), Postives = 165/171 (96.49%), Query Frame = 0 
Query:    1 MGAGGGALAVPIGTQEVSGEDLSKVVDAKIKLEGNDGRDGSGANRKRSRPQGSVSPSPNEPGFRDSDAAGGDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPADSRPTQTTFAWTDMLVDDDNSDDLDGMR 171
            MGAGGGALAVPIGTQEVSGEDLSKVV+A IKLEGNDGRDGSGANRKRSRPQGSV PSPNE GFRDSDAAGGDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AVP DSRPTQTTFAWTDML DDDNSDDLDGMR
Sbjct:  245 MGAGGGALAVPIGTQEVSGEDLSKVVEATIKLEGNDGRDGSGANRKRSRPQGSVPPSPNEQGFRDSDAAGGDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AVPVDSRPTQTTFAWTDMLGDDDNSDDLDGMR 414
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9681.31387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8S1_9PHAE2.320e-5060.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIW2_ECTSI1.420e-4495.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9681contigEcto-sp8_S_contig9681:2623..3888 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9681.31387.1mRNA_Ecto-sp8_S_contig9681.31387.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9681 2569..4767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9681.31387.1 ID=prot_Ecto-sp8_S_contig9681.31387.1|Name=mRNA_Ecto-sp8_S_contig9681.31387.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=172bp
MGAGGGALAVPIGTQEVSGEDLSKVVDAKIKLEGNDGRDGSGANRKRSRP
QGSVSPSPNEPGFRDSDAAGGDSGSGGRRGGAREAAMYLGSDDDEGIDED
RTPAKSRRRRVRKKPAASTAIAEGGGGGDGNHGSGGAAAAVPADSRPTQT
TFAWTDMLVDDDNSDDLDGMR*
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