prot_Ecto-sp8_S_contig9647.31334.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9647.31334.1
Unique Nameprot_Ecto-sp8_S_contig9647.31334.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length146
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9647.31334.1 vs. uniprot
Match: D8LEU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU1_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 1.620e-92
Identity = 139/145 (95.86%), Postives = 143/145 (98.62%), Query Frame = 0 
Query:    1 MKWATLGALLLCKASAFHLPGVVRVGPSRRANSVLERREARHAAGRVLACTAKDDGDKGVADEDDPLDLNLDDFSEAEISDAELDKMLQAVEHGISRHKPKALDSEAGQRGQVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV 145
            MKWATLGALLLCKASAFHLPGVVRVGPSRRANSVLERREARHAAGRVLACTAKD+ +KGVADEDDPLDLNLDDFSEAEISDAELDKMLQAVEHGISRHKPKALD EAG+RG+VDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV
Sbjct:   66 MKWATLGALLLCKASAFHLPGVVRVGPSRRANSVLERREARHAAGRVLACTAKDEANKGVADEDDPLDLNLDDFSEAEISDAELDKMLQAVEHGISRHKPKALDGEAGRRGEVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV 210
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BLAST of mRNA_Ecto-sp8_S_contig9647.31334.1 vs. uniprot
Match: A0A6H5KFW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW8_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 4.650e-89
Identity = 134/145 (92.41%), Postives = 139/145 (95.86%), Query Frame = 0 
Query:    1 MKWATLGALLLCKASAFHLPGVVRVGPSRRANSVLERREARHAAGRVLACTAKDDGDKGVADEDDPLDLNLDDFSEAEISDAELDKMLQAVEHGISRHKPKALDSEAGQRGQVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV 145
            MKWATLGALLLCK SAFHLP V RVGPSRRANSVL+RREARHAAGRVLACTAKD+G+KGVADEDDPLDLNLDDFSEAEISDAELDKML AVEHGISRHK KAL S+AGQRG+VDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV
Sbjct:    1 MKWATLGALLLCKVSAFHLPWVARVGPSRRANSVLDRREARHAAGRVLACTAKDEGNKGVADEDDPLDLNLDDFSEAEISDAELDKMLHAVEHGISRHKTKALGSKAGQRGEVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV 145
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9647.31334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEU1_ECTSI1.620e-9295.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFW8_9PHAE4.650e-8992.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..145
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.784

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9647contigEcto-sp8_S_contig9647:3958..5231 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9647.31334.1mRNA_Ecto-sp8_S_contig9647.31334.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9647 3920..5845 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9647.31334.1 ID=prot_Ecto-sp8_S_contig9647.31334.1|Name=mRNA_Ecto-sp8_S_contig9647.31334.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=146bp
MKWATLGALLLCKASAFHLPGVVRVGPSRRANSVLERREARHAAGRVLAC
TAKDDGDKGVADEDDPLDLNLDDFSEAEISDAELDKMLQAVEHGISRHKP
KALDSEAGQRGQVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV*
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