prot_Ecto-sp8_S_contig96310.31308.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig96310.31308.1
Unique Nameprot_Ecto-sp8_S_contig96310.31308.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length53
Homology
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BLAST of mRNA_Ecto-sp8_S_contig96310.31308.1 vs. uniprot
Match: D7FHX5_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX5_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.790e-27
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0 
Query:    1 LPPDAVAESRGWLRAWSEEHQAHFFANQWTGNVTWDLPGPGGQGWSTPQEQV 52
            LPPDAVAESRGWLRAWSEEHQAHFFANQWTGNVTWDL GP G+GWSTPQEQV
Sbjct:  780 LPPDAVAESRGWLRAWSEEHQAHFFANQWTGNVTWDLLGPRGEGWSTPQEQV 831
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BLAST of mRNA_Ecto-sp8_S_contig96310.31308.1 vs. uniprot
Match: A0A6H5KHS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHS3_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 9.640e-23
Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 0 
Query:    1 LPPDAVAESRGWLRAWSEEHQAHFFANQWTGNVTWDLPGPGGQGW 45
            LPPDAVAESRGWL AWSEEHQAHFFANQWTGNVTWDL GPGG+GW
Sbjct:  807 LPPDAVAESRGWLLAWSEEHQAHFFANQWTGNVTWDLLGPGGEGW 851
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig96310.31308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHX5_ECTSI1.790e-2794.23WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KHS3_9PHAE9.640e-2393.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.70.10coord: 1..51
e-value: 2.0E-6
score: 29.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig96310contigEcto-sp8_S_contig96310:48..206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig96310.31308.1mRNA_Ecto-sp8_S_contig96310.31308.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig96310 48..206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig96310.31308.1 ID=prot_Ecto-sp8_S_contig96310.31308.1|Name=mRNA_Ecto-sp8_S_contig96310.31308.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=53bp
LPPDAVAESRGWLRAWSEEHQAHFFANQWTGNVTWDLPGPGGQGWSTPQE
QV*
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