prot_Ecto-sp8_S_contig9591.31240.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9591.31240.1
Unique Nameprot_Ecto-sp8_S_contig9591.31240.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length230
Homology
BLAST of mRNA_Ecto-sp8_S_contig9591.31240.1 vs. uniprot
Match: D7FLZ5_ECTSI (40S ribosomal protein S4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLZ5_ECTSI)

HSP 1 Score: 461 bits (1187), Expect = 7.790e-164
Identity = 227/230 (98.70%), Postives = 229/230 (99.57%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFSMGHGTRAMVCI 230
            MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIF+MGHGTRAMV +
Sbjct:    9 MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRAMVSL 238          
BLAST of mRNA_Ecto-sp8_S_contig9591.31240.1 vs. uniprot
Match: A0A835ZEV0_9STRA (40S ribosomal protein S4 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEV0_9STRA)

HSP 1 Score: 376 bits (965), Expect = 5.190e-130
Identity = 177/230 (76.96%), Postives = 203/230 (88.26%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFSMGHGTRAMVCI 230
            +KRLNAPKHWLLGK+EGIWAPKPS GPH  RECLPL+II+RNRLKYALT +EANMICMQK +KVDGKVRTD+NFPAGFMDVV I+KS D FRLLYNTKGRFVLHR+ +EE+K+KLCRV KVE+SK KIP+LVTHDGRTIRYPDPL+KVND+IKVD+ETGK  D  K+EIGN+CMI+RG N GRVG +QHIERHPGSFDIV+VKD AG+VFATR  NIF +G  TR  + +
Sbjct:    8 LKRLNAPKHWLLGKLEGIWAPKPSCGPHNGRECLPLIIIVRNRLKYALTKAEANMICMQKHVKVDGKVRTDLNFPAGFMDVVSIEKSADQFRLLYNTKGRFVLHRVKDEEAKYKLCRVQKVEVSKKKIPFLVTHDGRTIRYPDPLVKVNDSIKVDVETGKMSDIYKYEIGNLCMISRGHNTGRVGTIQHIERHPGSFDIVTVKDSAGNVFATRQANIFVLGESTRPAISL 237          
BLAST of mRNA_Ecto-sp8_S_contig9591.31240.1 vs. uniprot
Match: A0A7S2WPT4_9STRA (40S ribosomal protein S4 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPT4_9STRA)

HSP 1 Score: 358 bits (920), Expect = 6.430e-123
Identity = 166/230 (72.17%), Postives = 198/230 (86.09%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFSMGHGTRAMVCI 230
            +KRLNAPK W+LGKMEGIWAP+PS GPH  RECLPL++I+RNRLKYALT+ E   ICMQ+L+K+DGKVRTD+ +PAGFMDVVQI++SGDLFRLLY+ KGRFVLHR+ E+E  FKLCRV KV++S  KIPY+VTHDGRTIRYPDPLIK NDT+KVDL TGK ID IKFEIG +CMI RGRNAGRVG++QH+E+HPGSFD+++VKD AG VFATRL NIF +G   +  V +
Sbjct:   25 LKRLNAPKAWMLGKMEGIWAPRPSAGPHKLRECLPLILILRNRLKYALTLQEVKAICMQRLVKIDGKVRTDMGYPAGFMDVVQIERSGDLFRLLYDVKGRFVLHRVKEDEGSFKLCRVMKVDVSAKKIPYVVTHDGRTIRYPDPLIKANDTVKVDLATGKIIDHIKFEIGRLCMIQRGRNAGRVGVIQHVEKHPGSFDMITVKDAAGKVFATRLGNIFVIGDDKKPWVSL 254          
BLAST of mRNA_Ecto-sp8_S_contig9591.31240.1 vs. uniprot
Match: W7TUQ1_9STRA (40S ribosomal protein S4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUQ1_9STRA)

HSP 1 Score: 344 bits (883), Expect = 1.470e-117
Identity = 161/232 (69.40%), Postives = 196/232 (84.48%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISE--EESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFSMGHGTRAMVCI 230
            +KR+NAP+HW+L KM+GI+AP+PS GPH  RE LPL++I+RNRLKYALT +EAN ICMQKL+KVDGKVRTD+NFPAGFMDV+ I+KSGD FRLLY+ KGRF L R+ E  EE  FKLCRVNK EMS NKIPY+VTHDGRTIRYPDPLIK++DT+KVD+ TGK +D IKF++GN+  + RG N GRVG++QHIERHPGSFDI++VKD  GH FATR QN+F +G G + MV +
Sbjct:    9 LKRVNAPRHWMLSKMDGIFAPRPSTGPHKLRESLPLILILRNRLKYALTKAEANAICMQKLVKVDGKVRTDLNFPAGFMDVITIEKSGDEFRLLYDVKGRFYLQRLEEGSEERNFKLCRVNKNEMSANKIPYIVTHDGRTIRYPDPLIKMDDTVKVDIRTGKILDFIKFDLGNLVYLTRGHNTGRVGMIQHIERHPGSFDIITVKDAQGHTFATRRQNVFVIGQGNKPMVSL 240          
BLAST of mRNA_Ecto-sp8_S_contig9591.31240.1 vs. uniprot
Match: A0A7S2HY22_9STRA (40S ribosomal protein S4 n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HY22_9STRA)

HSP 1 Score: 341 bits (875), Expect = 2.510e-116
Identity = 157/230 (68.26%), Postives = 192/230 (83.48%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFSMGHGTRAMVCI 230
            +KRLNAP+HW LGKM GIWAPKPSPGPH  RECLP+ I++R+RLKYALT  E   ICM++ +KVDGKVRTD NFPAGFMDV++++KSGD FRLL++TKGRFVLHRI+ EE+ +KLCRVNKV +S NKIP  VTHDGRTIRYPDP +KVND++KVD+E+GK  D +KFE+G++ MI RGRNAGRVG + HIE+H GSFDIV+VKD  GH F+TRLQN+F +G G    V +
Sbjct:    9 LKRLNAPRHWNLGKMRGIWAPKPSPGPHKQRECLPITIVLRDRLKYALTNKECMQICMERCVKVDGKVRTDHNFPAGFMDVIELEKSGDRFRLLFDTKGRFVLHRINREEASYKLCRVNKVFVSANKIPVAVTHDGRTIRYPDPDVKVNDSVKVDIESGKMSDILKFELGSMVMITRGRNAGRVGTLMHIEKHEGSFDIVTVKDTKGHTFSTRLQNVFVIGSGNHPQVTL 238          
BLAST of mRNA_Ecto-sp8_S_contig9591.31240.1 vs. uniprot
Match: A0A2D4CA31_PYTIN (40S ribosomal protein S4 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2D4CA31_PYTIN)

HSP 1 Score: 338 bits (868), Expect = 3.120e-115
Identity = 156/230 (67.83%), Postives = 190/230 (82.61%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFSMGHGTRAMVCI 230
            +KR++APKHW+LGK++GIWAP+PS GPH  RECLPLVII+RNRLKYALT  E   ICM KL+KVD K+R D +FPAGFMDV+++ KSGD FRLLY+TKGRFVLHRI+ EE K+KLC+V + E +K  IPY+ T+DGRTIRYPDPLIKVNDT+KVDLETGK +D IKFE GN+ M+  GRNAGRVGI+ HIERH GSF+I  +KD AGH FATRL N+F +G+ +R  V +
Sbjct:    9 LKRMSAPKHWMLGKLDGIWAPRPSSGPHKLRECLPLVIILRNRLKYALTKKEVTAICMNKLVKVDNKIRVDPDFPAGFMDVIELPKSGDAFRLLYDTKGRFVLHRINNEEKKYKLCKVTRQEYTKKAIPYIATNDGRTIRYPDPLIKVNDTVKVDLETGKVVDFIKFETGNLVMVTGGRNAGRVGILHHIERHEGSFNIAHIKDSAGHAFATRLGNVFVIGNESRPSVSL 238          
BLAST of mRNA_Ecto-sp8_S_contig9591.31240.1 vs. uniprot
Match: A0A5D6XRP7_9STRA (40S ribosomal protein S4 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRP7_9STRA)

HSP 1 Score: 336 bits (861), Expect = 2.750e-114
Identity = 157/230 (68.26%), Postives = 189/230 (82.17%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFSMGHGTRAMVCI 230
            +KR++APKHW+LGK++GIWAP+PS GPH  RECLPLVII+RNRLKYALT  E  MIC+ K +KVDGKVR D NFPAGFMDVV++ KSGD FRLLY+TKGRFVLHR+S EE K+KL +V + E +K  IPY+ T+DGRTIRYPDPLIKVNDT+K+DLETGK +D +K E GN+ MI RGRN GRVGI+ HIERH GSF+I  VKD AGH FATRL N+F +G  +R +V +
Sbjct:    3 LKRMSAPKHWMLGKLDGIWAPRPSSGPHKLRECLPLVIILRNRLKYALTKQEVMMICLHKQVKVDGKVRVDPNFPAGFMDVVELAKSGDQFRLLYDTKGRFVLHRVSNEEKKYKLAKVTRQEYTKKAIPYVATNDGRTIRYPDPLIKVNDTVKIDLETGKIVDFVKLEAGNMVMITRGRNTGRVGILHHIERHEGSFNIAHVKDSAGHDFATRLGNVFVIGSESRPLVSL 232          
BLAST of mRNA_Ecto-sp8_S_contig9591.31240.1 vs. uniprot
Match: F0WD75_9STRA (40S ribosomal protein S4 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WD75_9STRA)

HSP 1 Score: 333 bits (855), Expect = 2.770e-113
Identity = 150/230 (65.22%), Postives = 189/230 (82.17%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFSMGHGTRAMVCI 230
            +KRL+APKHW+LGK++G+WAP+PS GPH  RECLPL+II+RNRLKYALT  E  MICMQK +KVDGK+R D NFPAGFMD+V+I KSGD FRLLY+TKGRFVLHR++ EE K+KLC+V + E +K  IPY+ T+DGRTIRYPDPL+K NDT+K+DLETGK +D IKFE GN+ M+ RGRN G VG++  IERH GSF I  ++D  GH FATRL N+F++G+G+R  + +
Sbjct:    9 LKRLSAPKHWMLGKLDGVWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQEVTMICMQKAVKVDGKIRVDPNFPAGFMDIVEIPKSGDQFRLLYDTKGRFVLHRVNHEEKKYKLCKVIRQEYTKKGIPYVATNDGRTIRYPDPLVKSNDTVKIDLETGKIVDFIKFETGNLVMVTRGRNTGIVGMLHQIERHEGSFSIARIRDSTGHEFATRLGNVFAIGNGSRPWISL 238          
BLAST of mRNA_Ecto-sp8_S_contig9591.31240.1 vs. uniprot
Match: A0A067CQF7_SAPPC (40S ribosomal protein S4 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CQF7_SAPPC)

HSP 1 Score: 331 bits (849), Expect = 2.420e-112
Identity = 156/230 (67.83%), Postives = 188/230 (81.74%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFSMGHGTRAMVCI 230
            +KR++APKHW+LGK++GIWAP+PS GPH  RECLPL+IIIRNRLKYALT  E  MICMQKL+KVDGK R D NFPAGFMDVV+I KSGD+FRLLY+TKGRFVLHRI+EEE K+KL +V + E +  +IPY+ T+DGRTIRY DPLIKVNDT+K+D+ETGK +D IKFE G + MI RGRNAGRVGI+ HIERH GSF+I  +KD  G  FATR  N+F++G   R  V +
Sbjct:    9 LKRMSAPKHWMLGKLDGIWAPRPSSGPHKLRECLPLIIIIRNRLKYALTKQEVTMICMQKLVKVDGKTRVDPNFPAGFMDVVEITKSGDVFRLLYDTKGRFVLHRINEEEKKYKLAKVTRQEFTAKQIPYVATNDGRTIRYADPLIKVNDTVKIDIETGKVVDFIKFETGAMVMITRGRNAGRVGILHHIERHAGSFNIAHIKDTTGAEFATRQGNVFAVGKDGRPWVSL 238          
BLAST of mRNA_Ecto-sp8_S_contig9591.31240.1 vs. uniprot
Match: A0A485LNB5_9STRA (40S ribosomal protein S4 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNB5_9STRA)

HSP 1 Score: 330 bits (847), Expect = 4.880e-112
Identity = 153/230 (66.52%), Postives = 190/230 (82.61%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFSMGHGTRAMVCI 230
            +KR++APKHW+LGK++GIWAP+PS GPH  RECLPL+II+RNRLKYALT  E  MI MQKL+KVDGKVR D N+PAGFMDVV+I KSGD+FRLLY+TKGRFV+HRI+EEE K+KL +V + E++   IP++ T+DGRTIRYPDPLI+VNDT+K+DLETGK +D IKFE GN+ MI RGRN GRVGI  H+ERH GSF+IV VKD  G  FATR+ N+F++G   R  + +
Sbjct:    9 LKRMSAPKHWMLGKLDGIWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQEVTMIAMQKLVKVDGKVRVDPNYPAGFMDVVEITKSGDVFRLLYDTKGRFVIHRINEEEKKYKLAKVIRQELTDKAIPFIATNDGRTIRYPDPLIRVNDTVKIDLETGKVVDFIKFEAGNLVMITRGRNTGRVGIFHHLERHSGSFNIVHVKDSTGADFATRVGNVFAIGKENRPWISL 238          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9591.31240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLZ5_ECTSI7.790e-16498.7040S ribosomal protein S4 n=2 Tax=Ectocarpus TaxID=... [more]
A0A835ZEV0_9STRA5.190e-13076.9640S ribosomal protein S4 n=2 Tax=Tribonema minus T... [more]
A0A7S2WPT4_9STRA6.430e-12372.1740S ribosomal protein S4 n=1 Tax=Rhizochromulina m... [more]
W7TUQ1_9STRA1.470e-11769.4040S ribosomal protein S4 n=2 Tax=Monodopsidaceae T... [more]
A0A7S2HY22_9STRA2.510e-11668.2640S ribosomal protein S4 n=1 Tax=Helicotheca tames... [more]
A0A2D4CA31_PYTIN3.120e-11567.8340S ribosomal protein S4 n=3 Tax=Eukaryota TaxID=2... [more]
A0A5D6XRP7_9STRA2.750e-11468.2640S ribosomal protein S4 n=1 Tax=Pythium brassicum... [more]
F0WD75_9STRA2.770e-11365.2240S ribosomal protein S4 n=1 Tax=Albugo laibachii ... [more]
A0A067CQF7_SAPPC2.420e-11267.8340S ribosomal protein S4 n=3 Tax=Saprolegniaceae T... [more]
A0A485LNB5_9STRA4.880e-11266.5240S ribosomal protein S4 n=1 Tax=Aphanomyces stell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 166..193
e-value: 0.0049
score: 26.1
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 35..98
e-value: 1.3E-4
score: 31.3
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 35..82
e-value: 3.5E-9
score: 36.2
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 34..106
score: 9.995
IPR000876Ribosomal protein S4ePIRSFPIRSF002116RPS4a_RPS4ecoord: 1..229
e-value: 6.9E-92
score: 304.8
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 1..229
IPR000876Ribosomal protein S4eHAMAPMF_00485Ribosomal_S4ecoord: 1..230
score: 32.447
IPR013845Ribosomal protein S4e, central regionPFAMPF00900Ribosomal_S4ecoord: 88..160
e-value: 3.5E-34
score: 116.5
IPR038237Ribosomal protein S4e, central domain superfamilyGENE3D2.40.50.740coord: 114..168
e-value: 6.4E-28
score: 98.1
IPR013843Ribosomal protein S4e, N-terminalPFAMPF08071RS4NTcoord: 1..28
e-value: 1.5E-14
score: 53.8
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 169..230
e-value: 3.3E-23
score: 83.3
IPR03227740S ribosomal protein S4, C-terminal domainPFAMPF1612140S_S4_Ccoord: 204..228
e-value: 1.0E-6
score: 28.3
NoneNo IPR availableGENE3D3.10.290.40coord: 1..109
e-value: 1.2E-50
score: 172.2
NoneNo IPR availablePANTHERPTHR11581:SF040S RIBOSOMAL PROTEIN S4-RELATEDcoord: 1..229
NoneNo IPR availablePRODOMPD002667coord: 79..173
e-value: 2.0E-33
score: 355.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9591contigEcto-sp8_S_contig9591:266..6628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9591.31240.1mRNA_Ecto-sp8_S_contig9591.31240.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9591 266..6652 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9591.31240.1 ID=prot_Ecto-sp8_S_contig9591.31240.1|Name=mRNA_Ecto-sp8_S_contig9591.31240.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=230bp
MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTM
SEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGR
FVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVND
TIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIV
SVKDGAGHVFATRLQNIFSMGHGTRAMVCI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005824KOW
IPR002942S4_RNA-bd
IPR000876Ribosomal_S4e
IPR013845Ribosomal_S4e_central_region
IPR038237Ribosomal_S4e_central_sf
IPR013843Ribosomal_S4e_N
IPR014722Rib_L2_dom2
IPR03227740S_S4_C