prot_Ecto-sp8_S_contig95822.31224.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig95822.31224.1
Unique Nameprot_Ecto-sp8_S_contig95822.31224.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length193
Homology
BLAST of mRNA_Ecto-sp8_S_contig95822.31224.1 vs. uniprot
Match: A6EZ26_9GAMM (PBPb domain-containing protein n=14 Tax=Marinobacter TaxID=2742 RepID=A6EZ26_9GAMM)

HSP 1 Score: 370 bits (950), Expect = 2.980e-128
Identity = 184/194 (94.85%), Postives = 188/194 (96.91%), Query Frame = 0
Query:    1 IFAACLLFALTAQATAQTYVVGVEQGNFLPHYGVDEQGQYSGFARELLDLFAEHAGVTFIYKPLPVDELMPALVEGEVDFKYPDHPDWARAAKT-EXXXXSRPIVEYVDGVLVSPRRLGLDGDHLKRIGLVDGWTARGYEEKIEASQILPVPSDSLPEMIHQALLKNSDGAYYNVVVALHHINNVRVRPGVLVF 193
            IFAACLLFALTAQATAQTYVVGVEQGNF PHYGVDEQGQYSGFARELLDLFAEHAGVTFIYKPLPVDELMPALVEG+VDFKYPDHPDWAR+AKT +    SRPIVEYVDGVLVSPRRLGLDGDHLKRIGLVDGWTARGYEEKIEASQILPVPSD+LPEMIHQALLKNSDGAYYNVVVALHHINNVRVRPGVLVF
Sbjct:    4 IFAACLLFALTAQATAQTYVVGVEQGNFQPHYGVDEQGQYSGFARELLDLFAEHAGVTFIYKPLPVDELMPALVEGKVDFKYPDHPDWARSAKTGDRISYSRPIVEYVDGVLVSPRRLGLDGDHLKRIGLVDGWTARGYEEKIEASQILPVPSDNLPEMIHQALLKNSDGAYYNVVVALHHINNVRVRPGVLVF 197          
BLAST of mRNA_Ecto-sp8_S_contig95822.31224.1 vs. uniprot
Match: UPI0011E712C4 (transporter substrate-binding domain-containing protein n=1 Tax=Marinobacter fonticola TaxID=2603215 RepID=UPI0011E712C4)

HSP 1 Score: 251 bits (641), Expect = 3.120e-81
Identity = 125/194 (64.43%), Postives = 148/194 (76.29%), Query Frame = 0
Query:    1 IFAACLLFALTAQATAQTYVVGVEQGNFLPHYGVDEQGQYSGFARELLDLFAEHAGVTFIYKPLPVDELMPALVEGEVDFKYPDHPDWARA-AKTEXXXXSRPIVEYVDGVLVSPRRLGLDGDHLKRIGLVDGWTARGYEEKIEASQILPVPSDSLPEMIHQALLKNSDGAYYNVVVALHHINNVRVRPGVLVF 193
            I A  L  A +    AQTYVVGVE  NF+PHYG D+  +YSGFAR+LLDLFAE   V  +YK LP +EL  ALVEG++DFKYPD+PDWAR+    +    S PIVEYVDGVLV+PRR GL  +HLKR+ LV+GWT  GY+E+IE+SQIL + SDSL EM+ Q LLKNSDGAYYNVVVALH+INN+R RP VLVF
Sbjct:    4 ILAFSLALAFSTHTAAQTYVVGVEDTNFMPHYGFDKWRRYSGFARDLLDLFAEQTDVKLVYKALPTEELGAALVEGKIDFKYPDNPDWARSDGSADALSYSDPIVEYVDGVLVTPRRAGLAVEHLKRLALVEGWTPLGYQEQIESSQILAIRSDSLQEMVRQTLLKNSDGAYYNVVVALHYINNIRARPDVLVF 197          
BLAST of mRNA_Ecto-sp8_S_contig95822.31224.1 vs. uniprot
Match: A0A1C2DPY0_9PSED (PBPb domain-containing protein n=11 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A1C2DPY0_9PSED)

HSP 1 Score: 235 bits (599), Expect = 7.330e-75
Identity = 115/192 (59.90%), Postives = 146/192 (76.04%), Query Frame = 0
Query:    3 AACLLFALTAQATAQTYVVGVEQGNFLPHYGVDEQGQYSGFARELLDLFAEHAGVTFIYKPLPVDELMPALVEGEVDFKYPDHPDWARAAKT-EXXXXSRPIVEYVDGVLVSPRRLGLDGDHLKRIGLVDGWTARGYEEKIEASQILPVPSDSLPEMIHQALLKNSDGAYYNVVVALHHINNVRVRPGVLVF 193
            AA L+FA  A A + TYVVGVE   F+PHY +D QGQY GFARELLD FAE +GV  IY+PLPVDEL+ AL++G VDFKYPD+P W+ + K+      S+  V YVDGV+V+PRR+GL  + LKR+ +VDGWT +GYE +I+  Q+L V S  LP MI QA+LK++DGAYYNVVVA+H++NNVR +PG LVF
Sbjct:    7 AAALMFAAHALAES-TYVVGVEDARFMPHYSLDAQGQYQGFARELLDAFAEESGVRLIYRPLPVDELLSALLDGSVDFKYPDNPSWSISDKSGHGLHYSQAAVAYVDGVMVAPRRVGLGVEQLKRLAVVDGWTPKGYEARIDTKQVLLVGSSDLPRMIRQAMLKDTDGAYYNVVVAMHYLNNVRTKPGALVF 197          
BLAST of mRNA_Ecto-sp8_S_contig95822.31224.1 vs. uniprot
Match: A0A0D9AGY8_PSEST (PBPb domain-containing protein n=1 Tax=Pseudomonas stutzeri TaxID=316 RepID=A0A0D9AGY8_PSEST)

HSP 1 Score: 230 bits (587), Expect = 4.830e-73
Identity = 115/192 (59.90%), Postives = 142/192 (73.96%), Query Frame = 0
Query:    4 ACLLFALTAQATA-QTYVVGVEQGNFLPHYGVDEQGQYSGFARELLDLFAEHAGVTFIYKPLPVDELMPALVEGEVDFKYPDHPDWARAAKTEXXXX-SRPIVEYVDGVLVSPRRLGLDGDHLKRIGLVDGWTARGYEEKIEASQILPVPSDSLPEMIHQALLKNSDGAYYNVVVALHHINNVRVRPGVLVF 193
            A  L AL+A   A QTYVVGVEQ  F+PHY  D  G Y GFARELLD FA H+GV  +YK LPV+EL+PAL+ G +D KYPD+P+W+ AAK       S+ +V+Y+DGV+V+PRR GL  D LKR+ +VDGWT  GYE+++ A QIL V S  LP M+ QALLK+SDGAYYNVVVA H++NNVR +PG LVF
Sbjct:    6 AIALLALSAPVLAEQTYVVGVEQAAFMPHYDGDAHGNYRGFARELLDSFAAHSGVRLVYKVLPVEELLPALLAGRIDAKYPDNPNWSAAAKRGYRLHYSQAVVKYIDGVMVAPRRAGLGVDELKRLAVVDGWTPWGYEDRVAAGQILLVSSPDLPRMVRQALLKDSDGAYYNVVVAAHYLNNVRAKPGALVF 197          
BLAST of mRNA_Ecto-sp8_S_contig95822.31224.1 vs. uniprot
Match: A0A3D2M1Y5_PSESP (PBPb domain-containing protein (Fragment) n=1 Tax=Pseudomonas sp. TaxID=306 RepID=A0A3D2M1Y5_PSESP)

HSP 1 Score: 227 bits (578), Expect = 1.930e-72
Identity = 115/192 (59.90%), Postives = 140/192 (72.92%), Query Frame = 0
Query:    4 ACLLFALTAQATA-QTYVVGVEQGNFLPHYGVDEQGQYSGFARELLDLFAEHAGVTFIYKPLPVDELMPALVEGEVDFKYPDHPDWARAAKTEXXXX-SRPIVEYVDGVLVSPRRLGLDGDHLKRIGLVDGWTARGYEEKIEASQILPVPSDSLPEMIHQALLKNSDGAYYNVVVALHHINNVRVRPGVLVF 193
            A  L AL+    A QTYVVGVEQ  F+PHY  D QG Y GFARELLD FA H+GV  +YK LP ++L+PAL++G VD KYPD+P+W+ AAK       S+ +V YVDGV+V+PRR GL  D LKR+ +VDGWT  GYE++I A Q L V S  LP M+ QALLK+SDGAYYNVVVA H++NNVR +PG LVF
Sbjct:    6 AAALLALSVPVVAEQTYVVGVEQAAFMPHYDGDAQGNYRGFARELLDSFAAHSGVRLLYKVLPAEDLLPALLDGRVDAKYPDNPNWSGAAKRGYRLQYSQAVVNYVDGVMVAPRRAGLGVDELKRLAVVDGWTPWGYEDRIAARQSLLVSSRDLPRMVRQALLKDSDGAYYNVVVAAHYLNNVRAKPGALVF 197          
BLAST of mRNA_Ecto-sp8_S_contig95822.31224.1 vs. uniprot
Match: A0A658GCG5_9PSED (PBPb domain-containing protein n=2 Tax=unclassified Pseudomonas TaxID=196821 RepID=A0A658GCG5_9PSED)

HSP 1 Score: 227 bits (579), Expect = 7.870e-72
Identity = 111/192 (57.81%), Postives = 144/192 (75.00%), Query Frame = 0
Query:    4 ACLLFALTAQATAQ-TYVVGVEQGNFLPHYGVDEQGQYSGFARELLDLFAEHAGVTFIYKPLPVDELMPALVEGEVDFKYPDHPDWARAAKTEXXXX-SRPIVEYVDGVLVSPRRLGLDGDHLKRIGLVDGWTARGYEEKIEASQILPVPSDSLPEMIHQALLKNSDGAYYNVVVALHHINNVRVRPGVLVF 193
            A +LF     A AQ TY+VGVE  +FLPHY VD +G Y GFAR+LLD+FAE  GV   YKPLP D L+PAL+EGEVDFKYPD+P+WA  AK       S+P V+ VDGV+V+PRR+GL  + L+R+ +VDGWT  GYE +I+ +Q+L V SD LP M+ QALLK++DGAYYN+VVA ++++N+R +PG LVF
Sbjct:    6 ASVLFMCPFHAFAQQTYIVGVEAASFLPHYSVDAEGNYKGFARDLLDMFAEQIGVRLAYKPLPADGLLPALLEGEVDFKYPDNPNWAAPAKAGYQLYYSQPAVDIVDGVMVAPRRVGLGLEQLRRLAVVDGWTPWGYEARIKTNQMLLVSSDDLPHMMRQALLKDADGAYYNIVVATYYLDNIRAKPGALVF 197          
BLAST of mRNA_Ecto-sp8_S_contig95822.31224.1 vs. uniprot
Match: UPI001AB02AD6 (Transporter substrate-binding domain-containing protein n=2 Tax=Pseudomonas schmalbachii TaxID=2816993 RepID=UPI001AB02AD6)

HSP 1 Score: 227 bits (579), Expect = 8.640e-72
Identity = 110/186 (59.14%), Postives = 137/186 (73.66%), Query Frame = 0
Query:    9 ALTAQATAQTYVVGVEQGNFLPHYGVDEQGQYSGFARELLDLFAEHAGVTFIYKPLPVDELMPALVEGEVDFKYPDHPDWARAAKT-EXXXXSRPIVEYVDGVLVSPRRLGLDGDHLKRIGLVDGWTARGYEEKIEASQILPVPSDSLPEMIHQALLKNSDGAYYNVVVALHHINNVRVRPGVLVF 193
            AL+ QA+AQTYVVGVE+  F PHY +D QGQY GFAREL DLFA  +GV   Y+ LPVD L+PAL+ G VDFKYPD+P+WA+  K       S+P+VEYVDGVLV+P R+G   D+LKR+ +VDGWT RGYE +I   QI  VPS+ LP MI Q L   +DG Y+NVVVA ++++N+R RPG LVF
Sbjct:   13 ALSTQASAQTYVVGVEKLEFSPHYSIDSQGQYRGFARELFDLFAASSGVQLEYRVLPVDALLPALLSGSVDFKYPDNPNWAKKRKAGHELRYSQPVVEYVDGVLVAPERVGKGIDNLKRLAVVDGWTPRGYESRIADGQIWRVPSEELPRMIRQTLKNEADGGYFNVVVATYYLDNIRARPGALVF 198          
BLAST of mRNA_Ecto-sp8_S_contig95822.31224.1 vs. uniprot
Match: W8R1U8_PSEST (PBPb domain-containing protein n=1 Tax=Pseudomonas stutzeri TaxID=316 RepID=W8R1U8_PSEST)

HSP 1 Score: 227 bits (578), Expect = 1.120e-71
Identity = 112/194 (57.73%), Postives = 141/194 (72.68%), Query Frame = 0
Query:    1 IFAACLLFALTAQATAQTYVVGVEQGNFLPHYGVDEQGQYSGFARELLDLFAEHAGVTFIYKPLPVDELMPALVEGEVDFKYPDHPDWARAAKT-EXXXXSRPIVEYVDGVLVSPRRLGLDGDHLKRIGLVDGWTARGYEEKIEASQILPVPSDSLPEMIHQALLKNSDGAYYNVVVALHHINNVRVRPGVLVF 193
            I AA LL         QTYV+GVEQ  FLPHY  D QG Y GFAR+LLD FA  +G+  +YK LP DEL+PAL++G VD KYPD+P+W+  AK       S+ +V YVDGV+V+PRR+G   D L+R+ +VDGWT  GYE++I A+QIL V S++LP M+ QALLK+SDGAYYNVVVA H++NNVR +PG LVF
Sbjct:    4 ILAAALLVLSMPVIAEQTYVIGVEQAAFLPHYNGDAQGNYQGFARDLLDSFAADSGLRLVYKVLPADELLPALLDGRVDAKYPDNPNWSGPAKAGRRVHYSQAVVHYVDGVMVAPRRVGRGIDELRRLAVVDGWTPWGYEDRIAANQILLVSSENLPRMVRQALLKDSDGAYYNVVVAAHYLNNVRAKPGALVF 197          
BLAST of mRNA_Ecto-sp8_S_contig95822.31224.1 vs. uniprot
Match: A0A4R0PJ55_9PSED (Transporter substrate-binding domain-containing protein n=3 Tax=Pseudomonas TaxID=286 RepID=A0A4R0PJ55_9PSED)

HSP 1 Score: 226 bits (575), Expect = 3.180e-71
Identity = 113/194 (58.25%), Postives = 140/194 (72.16%), Query Frame = 0
Query:    2 FAACLLFALTAQATA-QTYVVGVEQGNFLPHYGVDEQGQYSGFARELLDLFAEHAGVTFIYKPLPVDELMPALVEGEVDFKYPDHPDWARAAKT-EXXXXSRPIVEYVDGVLVSPRRLGLDGDHLKRIGLVDGWTARGYEEKIEASQILPVPSDSLPEMIHQALLKNSDGAYYNVVVALHHINNVRVRPGVLVF 193
            F A  L AL+    A QTYV+GVEQ  F+PHY  D QG Y GFARELLD FA + GV   YK LP DEL+PAL+ G VD KYPD+P+W+  AK       S+ +V YVDGV+V+PRR+G   D L+R+ +VDGWT  GYE+++ A+QIL V S +LP M+ QALLK+SDGAYYNVVVA H++NNVR +PG LVF
Sbjct:    4 FLAVALLALSVPVAAEQTYVIGVEQAAFMPHYSGDAQGNYGGFARELLDSFAAYNGVRLTYKVLPADELLPALLNGRVDAKYPDNPNWSGPAKAGHRLHYSQAVVNYVDGVMVAPRRVGRGIDELRRLAVVDGWTPWGYEDRVAANQILLVSSQNLPRMVRQALLKDSDGAYYNVVVAAHYLNNVRAKPGALVF 197          
BLAST of mRNA_Ecto-sp8_S_contig95822.31224.1 vs. uniprot
Match: UPI001BD0B870 (Transporter substrate-binding domain-containing protein n=2 Tax=Pseudomonas lalucatii TaxID=1424203 RepID=UPI001BD0B870)

HSP 1 Score: 225 bits (574), Expect = 4.500e-71
Identity = 113/192 (58.85%), Postives = 140/192 (72.92%), Query Frame = 0
Query:    5 CLLFA--LTAQATAQTYVVGVEQGNFLPHYGVDEQGQYSGFARELLDLFAEHAGVTFIYKPLPVDELMPALVEGEVDFKYPDHPDWARAAKT-EXXXXSRPIVEYVDGVLVSPRRLGLDGDHLKRIGLVDGWTARGYEEKIEASQILPVPSDSLPEMIHQALLKNSDGAYYNVVVALHHINNVRVRPGVLVF 193
            C LFA  L     A++YVVGVE   F PHY +D+QGQY GFARELLD FA H+GV   Y+PLPV  L+PAL+ GEVD KYPD+ +WA+A KT      S+P+V YVDGVLV+PRR G   + LKR+ LVDGWT  GY+E+I+A QI    SD L +MIHQAL K++DG Y+NVVVA H+++N+R RPG LVF
Sbjct:    7 CSLFAVLLATGVRAESYVVGVEDLAFAPHYSIDKQGQYQGFARELLDAFAAHSGVALSYRPLPVTRLLPALLAGEVDLKYPDNANWAQAQKTGNGLAYSQPVVGYVDGVLVAPRRQGQPLERLKRLALVDGWTPWGYQERIDAKQIELAYSDDLRKMIHQALKKDTDGVYFNVVVATHYLDNIRARPGALVF 198          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95822.31224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A6EZ26_9GAMM2.980e-12894.85PBPb domain-containing protein n=14 Tax=Marinobact... [more]
UPI0011E712C43.120e-8164.43transporter substrate-binding domain-containing pr... [more]
A0A1C2DPY0_9PSED7.330e-7559.90PBPb domain-containing protein n=11 Tax=Pseudomona... [more]
A0A0D9AGY8_PSEST4.830e-7359.90PBPb domain-containing protein n=1 Tax=Pseudomonas... [more]
A0A3D2M1Y5_PSESP1.930e-7259.90PBPb domain-containing protein (Fragment) n=1 Tax=... [more]
A0A658GCG5_9PSED7.870e-7257.81PBPb domain-containing protein n=2 Tax=unclassifie... [more]
UPI001AB02AD68.640e-7259.14Transporter substrate-binding domain-containing pr... [more]
W8R1U8_PSEST1.120e-7157.73PBPb domain-containing protein n=1 Tax=Pseudomonas... [more]
A0A4R0PJ55_9PSED3.180e-7158.25Transporter substrate-binding domain-containing pr... [more]
UPI001BD0B8704.500e-7158.85Transporter substrate-binding domain-containing pr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.190.10coord: 9..120
e-value: 1.4E-10
score: 43.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..193
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.829
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 8..183
IPR001638Solute-binding protein family 3/N-terminal domain of MltFPFAMPF00497SBP_bac_3coord: 20..183
e-value: 2.6E-10
score: 40.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig95822contigEcto-sp8_S_contig95822:6..584 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig95822.31224.1mRNA_Ecto-sp8_S_contig95822.31224.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig95822 6..584 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig95822.31224.1 ID=prot_Ecto-sp8_S_contig95822.31224.1|Name=mRNA_Ecto-sp8_S_contig95822.31224.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=193bp
IFAACLLFALTAQATAQTYVVGVEQGNFLPHYGVDEQGQYSGFARELLDL
FAEHAGVTFIYKPLPVDELMPALVEGEVDFKYPDHPDWARAAKTEXXXXS
RPIVEYVDGVLVSPRRLGLDGDHLKRIGLVDGWTARGYEEKIEASQILPV
PSDSLPEMIHQALLKNSDGAYYNVVVALHHINNVRVRPGVLVF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001638Solute-binding_3/MltF_N