prot_Ecto-sp8_S_contig95786.31217.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig95786.31217.1
Unique Nameprot_Ecto-sp8_S_contig95786.31217.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length69
Homology
BLAST of mRNA_Ecto-sp8_S_contig95786.31217.1 vs. uniprot
Match: D7FQB0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB0_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 9.540e-45
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
Query:    1 AHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSD 69
            AHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSD
Sbjct:  258 AHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSD 326          
BLAST of mRNA_Ecto-sp8_S_contig95786.31217.1 vs. uniprot
Match: A0A2R5GQ58_9STRA (Nuclear distribution protein PAC1-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQ58_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.160e-27
Identity = 44/69 (63.77%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    1 AHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSD 69
            AH+  VRDLDYNPNKP+ L T GEDR +KFWD+R+P+ P+K I+ HDHWV  V+YNRFHDQL++S  +D
Sbjct:  255 AHKLGVRDLDYNPNKPYHLVTGGEDRRVKFWDVRKPDQPLKVILAHDHWVGAVRYNRFHDQLVLSAGTD 323          
BLAST of mRNA_Ecto-sp8_S_contig95786.31217.1 vs. uniprot
Match: A0A7S2HX18_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HX18_9STRA)

HSP 1 Score: 106 bits (264), Expect = 9.530e-26
Identity = 44/70 (62.86%), Postives = 55/70 (78.57%), Query Frame = 0
Query:    1 AHRF-AVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSD 69
            AH + ++RD+DYNPNK   +AT GEDRLIKFWDLR P  P++ + GH HWV  +K+NRFHDQLLVSG +D
Sbjct:  234 AHEYGSIRDIDYNPNKRHVVATSGEDRLIKFWDLRSPGEPMRILAGHSHWVPCIKFNRFHDQLLVSGGTD 303          
BLAST of mRNA_Ecto-sp8_S_contig95786.31217.1 vs. uniprot
Match: A0A835Z343_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z343_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.010e-25
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    1 AHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGH-DHWVNTVKYNRFHDQLLVSGSSD 69
            AHR+A RD+DY+P KP C+ TCGEDRL++FWDLR P  P+K+++ H +HW   V YNRFHDQLL +  SD
Sbjct:  231 AHRYACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQPLKSVLAHRNHWATRVAYNRFHDQLLATAGSD 300          
BLAST of mRNA_Ecto-sp8_S_contig95786.31217.1 vs. uniprot
Match: A0A418ASN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418ASN5_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.380e-24
Identity = 40/69 (57.97%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    1 AHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSD 69
            AH   VRD+DY+PNKP+ +A+ G+D L+KFWD+R+P   + ++ GH+HWV  VKYNRFHDQL++S SSD
Sbjct:   29 AHFQCVRDIDYSPNKPYYIASGGDDGLVKFWDVRKPKTALLSLRGHNHWVWCVKYNRFHDQLVLSSSSD 97          
BLAST of mRNA_Ecto-sp8_S_contig95786.31217.1 vs. uniprot
Match: A0A1D2NJ17_ORCCI (Protein TSSC1 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NJ17_ORCCI)

HSP 1 Score: 102 bits (255), Expect = 1.560e-24
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    1 AHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSD 69
            AH+F VRD+D+NPNK +CLATCG+D  I+FWD+R    P+K I  H HWV  V+YN FHDQLL++  SD
Sbjct:  214 AHKFQVRDVDFNPNKQYCLATCGDDCAIRFWDVRNHKEPLKDIKAHSHWVWRVRYNSFHDQLLLTAGSD 282          
BLAST of mRNA_Ecto-sp8_S_contig95786.31217.1 vs. uniprot
Match: A0A6A4W5T6_AMPAM (EARP-interacting n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4W5T6_AMPAM)

HSP 1 Score: 100 bits (248), Expect = 2.940e-24
Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 0
Query:    6 VRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSD 69
            VRDLD+NPNK + LATCG+D  +KFWD+R+P AP+K +V H HWV  V++N FHDQL+++ SSD
Sbjct:  109 VRDLDFNPNKQYYLATCGDDCRVKFWDIRKPTAPLKVLVDHSHWVWRVRFNHFHDQLVLTSSSD 172          
BLAST of mRNA_Ecto-sp8_S_contig95786.31217.1 vs. uniprot
Match: A0A2G9P1B6_LITCT (Uncharacterized protein (Fragment) n=4 Tax=Neobatrachia TaxID=8416 RepID=A0A2G9P1B6_LITCT)

HSP 1 Score: 97.8 bits (242), Expect = 3.110e-24
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    1 AHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSD 69
            AH   VRDLD+NPNK + LA+CG+D  +KFWD R  N PVKT+  H HWV +V+YN  HDQL+++GSSD
Sbjct:    8 AHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVNEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSD 76          
BLAST of mRNA_Ecto-sp8_S_contig95786.31217.1 vs. uniprot
Match: A0A812DIY3_SEPPH (EIPR1 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812DIY3_SEPPH)

HSP 1 Score: 102 bits (253), Expect = 3.580e-24
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    1 AHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSD 69
            AH   VRDLD+NPNK + LA+CG+D  +KFWD+R P+ P KT+  H HWV +V+YN FHDQL++S SSD
Sbjct:  223 AHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDVRNPSTPTKTLTDHSHWVWSVRYNHFHDQLVLSSSSD 291          
BLAST of mRNA_Ecto-sp8_S_contig95786.31217.1 vs. uniprot
Match: A0A822BA27_9NEOB ((mimic poison frog) hypothetical protein (Fragment) n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A822BA27_9NEOB)

HSP 1 Score: 97.8 bits (242), Expect = 9.370e-24
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    1 AHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSD 69
            AH   VRDLD+NPNK + LA+CG+D  +KFWD R  N PVKT+  H HWV +V+YN  HDQL+++GSSD
Sbjct:   54 AHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVNEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSD 122          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95786.31217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB0_ECTSI9.540e-45100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2R5GQ58_9STRA1.160e-2763.77Nuclear distribution protein PAC1-1 n=1 Tax=Hondae... [more]
A0A7S2HX18_9STRA9.530e-2662.86Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835Z343_9STRA2.010e-2560.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A418ASN5_9STRA1.380e-2457.97Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1D2NJ17_ORCCI1.560e-2459.42Protein TSSC1 n=1 Tax=Orchesella cincta TaxID=4870... [more]
A0A6A4W5T6_AMPAM2.940e-2460.94EARP-interacting n=1 Tax=Amphibalanus amphitrite T... [more]
A0A2G9P1B6_LITCT3.110e-2459.42Uncharacterized protein (Fragment) n=4 Tax=Neobatr... [more]
A0A812DIY3_SEPPH3.580e-2459.42EIPR1 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A... [more]
A0A822BA27_9NEOB9.370e-2459.42(mimic poison frog) hypothetical protein (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..69
e-value: 9.3E-20
score: 73.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 1..32
e-value: 2.9E-5
score: 24.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..41
score: 10.676
NoneNo IPR availablePANTHERPTHR14205:SF15EARP-INTERACTING PROTEINcoord: 1..69
IPR040323EARP and GARP complex-interacting protein 1PANTHERPTHR14205WD-REPEAT PROTEINcoord: 1..69
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 19..33
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..69
score: 14.687
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig95786contigEcto-sp8_S_contig95786:4..583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig95786.31217.1mRNA_Ecto-sp8_S_contig95786.31217.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig95786 4..583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig95786.31217.1 ID=prot_Ecto-sp8_S_contig95786.31217.1|Name=mRNA_Ecto-sp8_S_contig95786.31217.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=69bp
AHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGHDHWV
NTVKYNRFHDQLLVSGSSD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR040323EIPR1
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf