prot_Ecto-sp8_S_contig9573.31205.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9573.31205.1
Unique Nameprot_Ecto-sp8_S_contig9573.31205.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length114
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9573.31205.1 vs. uniprot
Match: A0A6H5L8Y3_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Y3_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 1.060e-58
Identity = 108/114 (94.74%), Postives = 110/114 (96.49%), Query Frame = 0 
Query:    1 LVSAASVEHGDDTEDTNEKLREATRNGAKRKARVLSKHRAVLARWTASPATGVNPRRQQHNGANGCSTGDSPAAPRYSGTRSSEDIPPVDTVADRSEEGRVQNDIVSPLLSLAS 114
            LVSAASVEHGDDTEDT+EKLREATRNGAKRKARVLSKH AVLARWTASPATGVNPRRQQHNGANGCSTGDSPAAPRYSGTRSSEDIP VD VADRSEE RVQN+IVSPLLSLAS
Sbjct:   13 LVSAASVEHGDDTEDTHEKLREATRNGAKRKARVLSKHHAVLARWTASPATGVNPRRQQHNGANGCSTGDSPAAPRYSGTRSSEDIPHVDAVADRSEEVRVQNNIVSPLLSLAS 126
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9573.31205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L8Y3_9PHAE1.060e-5894.74SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9573contigEcto-sp8_S_contig9573:556..2782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9573.31205.1mRNA_Ecto-sp8_S_contig9573.31205.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9573 556..2782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9573.31205.1 ID=prot_Ecto-sp8_S_contig9573.31205.1|Name=mRNA_Ecto-sp8_S_contig9573.31205.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=114bp
LVSAASVEHGDDTEDTNEKLREATRNGAKRKARVLSKHRAVLARWTASPA
TGVNPRRQQHNGANGCSTGDSPAAPRYSGTRSSEDIPPVDTVADRSEEGR
VQNDIVSPLLSLAS
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