prot_Ecto-sp8_S_contig9501.31076.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9501.31076.1
Unique Nameprot_Ecto-sp8_S_contig9501.31076.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length547
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9501.31076.1 vs. uniprot
Match: D8LFX6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX6_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 6.440e-49
Identity = 82/89 (92.13%), Postives = 82/89 (92.13%), Query Frame = 0 
Query:    1 MPSKCASPGCPTNPSFGLNDGKRKVLFCRGHAKEGMINVRDRTCCHPGGCPTRPSYAEAGSKKPEFXVLXXXXXTVDVLSRRCARKDCL 89
            MPSKCASPGCPTNPSFGLNDGKRKVLFCRGHAKEGMINVRDRTCCHPGGCPTRPSYAEAGSKKPEF VL     TVDVLSRRCARK CL
Sbjct:    1 MPSKCASPGCPTNPSFGLNDGKRKVLFCRGHAKEGMINVRDRTCCHPGGCPTRPSYAEAGSKKPEFCVLHAPKGTVDVLSRRCARKGCL 89
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BLAST of mRNA_Ecto-sp8_S_contig9501.31076.1 vs. uniprot
Match: A0A6H5JT55_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT55_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 3.360e-34
Identity = 107/160 (66.88%), Postives = 110/160 (68.75%), Query Frame = 0 
Query:  386 AAATAAAAPSQTLAANGEIGSLGDEAPAASEATALAPTPTPEEPATAIAEAAAPEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEPRVQGGDGGAGDAAAFEAAPDSDGTESDIDVCGPGRRRPGDXXXXXXFGLNRRGAAGLGGSDYIVQPEGHVR 545
            AAATAAAAPSQTL ANGEI SLGDEAPA+ E TALAP PTPE+PA                             XXXXXXXXXXXX     QGG    GDAAA EAAPDSDGTESDIDVCGPGRRRPGD      FGLNRRGAAGLGGSDYIV+PEGHVR
Sbjct:  339 AAATAAAAPSQTLVANGEIISLGDEAPASPETTALAPPPTPEKPAX----------------------------XXXXXXXXXXXXXXXXXQGGXX-XGDAAALEAAPDSDGTESDIDVCGPGRRRPGDESDDDIFGLNRRGAAGLGGSDYIVRPEGHVR 469
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9501.31076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFX6_ECTSI6.440e-4992.13EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JT55_9PHAE3.360e-3466.88HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9501contigEcto-sp8_S_contig9501:5565..7205 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9501.31076.1mRNA_Ecto-sp8_S_contig9501.31076.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9501 3849..7205 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9501.31076.1 ID=prot_Ecto-sp8_S_contig9501.31076.1|Name=mRNA_Ecto-sp8_S_contig9501.31076.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=547bp
MPSKCASPGCPTNPSFGLNDGKRKVLFCRGHAKEGMINVRDRTCCHPGGC
PTRPSYAEAGSKKPEFCVLHAPKGTVDVLSRRCARKDCLVSPSFGVKGSK
KVEFCQEHAKEGMVNVRIKQCEQQGCTTMPTYGKDGSKRPQYCHRHATGE
MINLHSKRCSHPGCTKQPSYGVDGTNKAELCAEHGKPGMVNVRMKRCSYR
SCTRQPSYSMDGSRTPEFCSRHATDGMIDVRSKKCRHAGCVKVASYGEAH
TGSREFCGAHATEGMVALAVRQRRSENGHARGPRRGSAASSASAAAVAAA
AAVAVTADVSADVTAATAAADSDGGKRKGRALPLSAAEESSGDGIIEAMN
KRTRQVLGTVAAPPVPASPVPPAGVPQDPEREGAAAAATAAAAPSQTLAA
NGEIGSLGDEAPAASEATALAPTPTPEEPATAIAEAAAPEPAAAAPEPAA
AAPEPAAAAPEPAAVAPEPAAPEPRVQGGDGGAGDAAAFEAAPDSDGTES
DIDVCGPGRRRPGDESDDDIFGLNRRGAAGLGGSDYIVQPEGHVRV*
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