prot_Ecto-sp8_S_contig94929.31056.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94929.31056.1
Unique Nameprot_Ecto-sp8_S_contig94929.31056.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length63
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94929.31056.1 vs. uniprot
Match: D7G5I7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I7_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 1.050e-38
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0 
Query:    1 FLDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPR 63
            FLDEEDADSALKGLMGRWYA RPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPR
Sbjct:  175 FLDEEDADSALKGLMGRWYASRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPR 237
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94929.31056.1 vs. uniprot
Match: A0A7S3XMX4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMX4_HETAK)

HSP 1 Score: 121 bits (304), Expect = 5.450e-33
Identity = 53/63 (84.13%), Postives = 57/63 (90.48%), Query Frame = 0 
Query:    1 FLDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPR 63
            + DEEDADSALK L GR+YAGRP++CEFSPVTDFREARCRQFDEGTC RGG CNFMHVK VPR
Sbjct:  138 YADEEDADSALKALYGRFYAGRPLICEFSPVTDFREARCRQFDEGTCARGGYCNFMHVKAVPR 200
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94929.31056.1 vs. uniprot
Match: A0A7S2V6D5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6D5_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.380e-31
Identity = 51/63 (80.95%), Postives = 56/63 (88.89%), Query Frame = 0 
Query:    1 FLDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPR 63
            F DEEDAD ALK L GR+YAGRP++CEFSPVTDFREARCRQ+DEGTC RGG CNFMHVK +PR
Sbjct:   47 FTDEEDADKALKALYGRFYAGRPLVCEFSPVTDFREARCRQYDEGTCQRGGYCNFMHVKRMPR 109
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94929.31056.1 vs. uniprot
Match: A0A835ZC00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC00_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.510e-31
Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 0 
Query:    1 FLDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPR 63
            F DEEDAD+ALKGL GRWYAGRP++ EFSPVTDFREARCRQ+DEGTC RGGQCNFMHV+ V R
Sbjct:  177 FSDEEDADNALKGLFGRWYAGRPMVPEFSPVTDFREARCRQYDEGTCGRGGQCNFMHVRHVSR 239
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94929.31056.1 vs. uniprot
Match: A0A835YWK2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWK2_9STRA)

HSP 1 Score: 115 bits (288), Expect = 8.070e-31
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0 
Query:    1 FLDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPR 63
            F DEEDAD+ALKGL GRWY GRP++ EFSPV DFREARCRQ+DEGTC RGGQCNFMHV+ V +
Sbjct:  136 FSDEEDADAALKGLFGRWYGGRPMVPEFSPVNDFREARCRQYDEGTCGRGGQCNFMHVRHVSK 198
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94929.31056.1 vs. uniprot
Match: H3G5Y3_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3G5Y3_PHYRM)

HSP 1 Score: 115 bits (287), Expect = 9.310e-31
Identity = 50/63 (79.37%), Postives = 55/63 (87.30%), Query Frame = 0 
Query:    1 FLDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPR 63
            F DEE A +A K L GR+YAGRP++CEFSPVTDFREARCRQFDEGTCNRGG CNFMH+K VPR
Sbjct:  115 FDDEEHAAAAQKALYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVPR 177
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94929.31056.1 vs. uniprot
Match: A0A484E7J8_BRELC (C3H1-type domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7J8_BRELC)

HSP 1 Score: 114 bits (285), Expect = 3.560e-30
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0 
Query:    1 FLDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPR 63
            + DEE A +A K L GR+YAGRP++CEFSPVTDFREARCRQFDEGTCNRGG CNFMH+K VPR
Sbjct:   66 YEDEEHAAAAQKALYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVPR 128
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94929.31056.1 vs. uniprot
Match: K3WKD1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKD1_GLOUD)

HSP 1 Score: 114 bits (286), Expect = 2.120e-29
Identity = 50/63 (79.37%), Postives = 55/63 (87.30%), Query Frame = 0 
Query:    1 FLDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPR 63
            F DEE A +A K L GR+YAGRP++CEFSPVTDFREARCRQFDEGTCNRGG CNFMH+K VPR
Sbjct:  172 FEDEECAAAAQKSLYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVPR 234
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94929.31056.1 vs. uniprot
Match: A0A6A3M9C2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3M9C2_9STRA)

HSP 1 Score: 114 bits (285), Expect = 3.300e-29
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0 
Query:    1 FLDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPR 63
            + DEE A +A K L GR+YAGRP++CEFSPVTDFREARCRQFDEGTCNRGG CNFMH+K VPR
Sbjct:  170 YEDEEHAAAAQKALYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVPR 232
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94929.31056.1 vs. uniprot
Match: A0A662X699_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X699_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.570e-29
Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 0 
Query:    1 FLDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPR 63
            F DEE A +A K L GR+Y GRP++CEFSPVTDFREARCRQFDEGTCNRGG CNFMH+K VPR
Sbjct:  202 FEDEEHAAAAQKALYGRFYGGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVPR 264
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94929.31056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5I7_ECTSI1.050e-3898.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XMX4_HETAK5.450e-3384.13Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2V6D5_9STRA1.380e-3180.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZC00_9STRA1.510e-3182.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YWK2_9STRA8.070e-3177.78Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
H3G5Y3_PHYRM9.310e-3179.37Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A484E7J8_BRELC3.560e-3077.78C3H1-type domain-containing protein n=1 Tax=Bremia... [more]
K3WKD1_GLOUD2.120e-2979.37Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6A3M9C2_9STRA3.300e-2977.78Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A662X699_9STRA7.570e-2977.78Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009145U2 auxiliary factor small subunitPRINTSPR01848U2AUXFACTORcoord: 15..39
score: 62.36
coord: 50..62
score: 61.19
IPR009145U2 auxiliary factor small subunitPANTHERPTHR12620U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNITcoord: 2..63
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 33..59
e-value: 3.5E-5
score: 33.2
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 35..59
e-value: 4.2E-8
score: 32.9
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 33..60
score: 14.202
NoneNo IPR availableGENE3D4.10.1000.10coord: 27..63
e-value: 2.7E-5
score: 26.1
NoneNo IPR availablePANTHERPTHR12620:SF34SPLICING FACTOR U2AF SMALL SUBUNIT Acoord: 2..63
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..26
e-value: 2.9E-6
score: 29.5
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 34..57
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 1..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94929contigEcto-sp8_S_contig94929:7..453 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94929.31056.1mRNA_Ecto-sp8_S_contig94929.31056.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94929 7..453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94929.31056.1 ID=prot_Ecto-sp8_S_contig94929.31056.1|Name=mRNA_Ecto-sp8_S_contig94929.31056.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=63bp
FLDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRG
GQCNFMHVKPVPR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009145U2AF_small
IPR000571Znf_CCCH
IPR012677Nucleotide-bd_a/b_plait_sf
IPR036855Znf_CCCH_sf
IPR035979RBD_domain_sf