prot_Ecto-sp8_S_contig9461.31000.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9461.31000.1
Unique Nameprot_Ecto-sp8_S_contig9461.31000.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length66
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9461.31000.1 vs. uniprot
Match: D7FW21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW21_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 2.790e-21
Identity = 58/67 (86.57%), Postives = 59/67 (88.06%), Query Frame = 0 
Query:    1 GGRVAANGGKARVARVVAKTLETTKEAPTTPSSVPGPLPSGAAAVA--PKRRRGRPRKTAVAPTQTE 65
            GGRVAAN GKARVARVVAKTLETTKEAPT PSSVPG LP+ AAA    PKRRRGRPRKTAVAPTQTE
Sbjct:  882 GGRVAANDGKARVARVVAKTLETTKEAPT-PSSVPGSLPAAAAAAPTPPKRRRGRPRKTAVAPTQTE 947
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BLAST of mRNA_Ecto-sp8_S_contig9461.31000.1 vs. uniprot
Match: A0A6H5JCZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ4_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.510e-16
Identity = 52/68 (76.47%), Postives = 53/68 (77.94%), Query Frame = 0 
Query:    1 GGRVAANGGKARVARVVAKTLETTKEAPTTPSSVPGPLPSGAAAVAP---KRRRGRPRKTAVAPTQTE 65
            GGRVAANGGKARVARV AKT ETTKEA T+ SSVPG LP    A AP   KRRRGRPRKT V PTQTE
Sbjct:  595 GGRVAANGGKARVARVEAKTKETTKEALTS-SSVPGSLPPAGVAAAPTPPKRRRGRPRKTTVVPTQTE 661
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9461.31000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW21_ECTSI2.790e-2186.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCZ4_9PHAE1.510e-1676.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9461contigEcto-sp8_S_contig9461:41..238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9461.31000.1mRNA_Ecto-sp8_S_contig9461.31000.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9461 41..750 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9461.31000.1 ID=prot_Ecto-sp8_S_contig9461.31000.1|Name=mRNA_Ecto-sp8_S_contig9461.31000.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=66bp
GGRVAANGGKARVARVVAKTLETTKEAPTTPSSVPGPLPSGAAAVAPKRR
RGRPRKTAVAPTQTE*
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