prot_Ecto-sp8_S_contig9452.30981.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9452.30981.1
Unique Nameprot_Ecto-sp8_S_contig9452.30981.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length582
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9452.30981.1 vs. uniprot
Match: A0A6H5KRS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS6_9PHAE)

HSP 1 Score: 805 bits (2080), Expect = 2.020e-288
Identity = 439/497 (88.33%), Postives = 451/497 (90.74%), Query Frame = 0 
Query:   87 MAPTQHLSSFNSSFSSFLDEASCGTRRKSLPLLIREHRPAEIRFKNMVRGREFSEALRSLELNIDQVRESLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPAPLAAVGGAGGXSEDEEEGAVNTELAQLTVELIGAANAAMLVPHLIHGLTGEEQGAGETPSAEEVRPAAATLGAQVGGLKAYWPCLRELTLSCGIMRGDLEDLAGCLGSLPALEVLVLAGHSYRAPQTTLVAFARALHEPAASPAAPIRPRRLRMLSLKHFTVEGVEGVAALGEALSAERFPRLAALSINSCRLGDKQLCALAATLPGMSRTLKTLSFRSNYALSSVGVSALAEALRAPATATNAGSATTATPTKPGFAPTAGCPLSCSASAGATTTGAGAPTAKKPLPERAPAWWVPSXXXXXXXXXXXXXXPXXXXXXXXXX-AAPARLTIESLDLSYSCWWNRPERAARTGSESSAGGGGGPFAGLLKILGEGVACPSLRSLRLEGCYL 582
            MAPTQHLSSFNSSFSSFLDEASC TR  SLPLL+REHRPAEIRFKNMVRG EFS+ALRSLELNIDQVR+SLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGP PLA VG AGG SEDEEEGAV+TELAQLTVEL+G ANAA LVP LIHGLTGEE+GAGETPSAEEVRPAAA LGA+V GLKAYWPCLRELTLSCGIMRGDLEDL+ CLGSLPALEVLVLAGHSYRAPQTTLVAFARALHE AASPAAPIRPRRLR LSLKHFTVEGVEGVA LGE LSAERFPRLA+LSI+SCRLGDKQLCALAA LPGMSRTLKTLSFRSNYALSSVGVSALAEALRAPATAT+ GSAT ATPTKPGF PT GC L  SASAGATTTGAGAPTA+KPLPERAPAW VPS  XXXXXXXXX   P           AAPA LTIESLDLSYSCWWNRPERAARTGSESSA GG GPFAGLLKILGEGVACPSLRSLRLEGCYL
Sbjct:    1 MAPTQHLSSFNSSFSSFLDEASCITRHNSLPLLVREHRPAEIRFKNMVRGGEFSDALRSLELNIDQVRKSLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPGPLAEVGDAGGGSEDEEEGAVDTELAQLTVELMGPANAATLVPQLIHGLTGEEEGAGETPSAEEVRPAAAKLGAKVRGLKAYWPCLRELTLSCGIMRGDLEDLSACLGSLPALEVLVLAGHSYRAPQTTLVAFARALHESAASPAAPIRPRRLRTLSLKHFTVEGVEGVATLGEVLSAERFPRLASLSIDSCRLGDKQLCALAAMLPGMSRTLKTLSFRSNYALSSVGVSALAEALRAPATATDGGSATAATPTKPGFFPTTGCLLGRSASAGATTTGAGAPTAEKPLPERAPAWSVPSSSXXXXXXXXXTNCPRPTAAAAEAASAAPAHLTIESLDLSYSCWWNRPERAARTGSESSAKGGSGPFAGLLKILGEGVACPSLRSLRLEGCYL 497
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BLAST of mRNA_Ecto-sp8_S_contig9452.30981.1 vs. uniprot
Match: D8LI43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI43_ECTSI)

HSP 1 Score: 563 bits (1452), Expect = 9.820e-198
Identity = 289/299 (96.66%), Postives = 290/299 (96.99%), Query Frame = 0 
Query:    1 MRSLSPNVVEHILQWLDLASHLRLREASTFDRDETPRRTTTLAARGSEQARRCQLVIFTPDKKTRLHSITLDVTAPSSGSSSSSCGMAPTQHLSSFNSSFSSFLDEASCGTRRKSLPLLIREHRPAEIRFKNMVRGREFSEALRSLELNIDQVRESLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPAPLAAVGGAGGXSEDEEEGAVNTELAQLTVELIGAANAAMLVPHLIHGLTGEEQGAGETPSAEEVRPAAATLGAQVGGLKAYWPCLRELTLSCGIMRGDLEDLAGCLG 299
            MRSLSPNVVEHILQWLDLASHLRLREASTFDRDETPRRTTTLAARGSEQARRCQLVIFTPDKKTRLHSITLDVTAPSSGSSSS CGM PTQHLSSFNSSFSSFLDEASC  RR SLPLLIREHRPAEIRFKNMVRGREFSEALRSLELNIDQVRESLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPAPLAAVGGAGG SEDE EGAVNTELAQLTVELIGAANAAMLVPHLIHGLTGEEQGAG+TPSAEE RPAAATLGAQVGGLKAYWPCLREL LSCGIMRGDLEDLAGCLG
Sbjct:    1 MRSLSPNVVEHILQWLDLASHLRLREASTFDRDETPRRTTTLAARGSEQARRCQLVIFTPDKKTRLHSITLDVTAPSSGSSSSKCGMEPTQHLSSFNSSFSSFLDEASCAKRRNSLPLLIREHRPAEIRFKNMVRGREFSEALRSLELNIDQVRESLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPAPLAAVGGAGGGSEDEGEGAVNTELAQLTVELIGAANAAMLVPHLIHGLTGEEQGAGDTPSAEEFRPAAATLGAQVGGLKAYWPCLRELMLSCGIMRGDLEDLAGCLG 299
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9452.30981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRS6_9PHAE2.020e-28888.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI43_ECTSI9.820e-19896.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 257..435
e-value: 3.8E-15
score: 57.0
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 274..582

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9452contigEcto-sp8_S_contig9452:2413..5973 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9452.30981.1mRNA_Ecto-sp8_S_contig9452.30981.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9452 2413..5973 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9452.30981.1 ID=prot_Ecto-sp8_S_contig9452.30981.1|Name=mRNA_Ecto-sp8_S_contig9452.30981.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=582bp
MRSLSPNVVEHILQWLDLASHLRLREASTFDRDETPRRTTTLAARGSEQA
RRCQLVIFTPDKKTRLHSITLDVTAPSSGSSSSSCGMAPTQHLSSFNSSF
SSFLDEASCGTRRKSLPLLIREHRPAEIRFKNMVRGREFSEALRSLELNI
DQVRESLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPAPLAAVGGA
GGGSEDEEEGAVNTELAQLTVELIGAANAAMLVPHLIHGLTGEEQGAGET
PSAEEVRPAAATLGAQVGGLKAYWPCLRELTLSCGIMRGDLEDLAGCLGS
LPALEVLVLAGHSYRAPQTTLVAFARALHEPAASPAAPIRPRRLRMLSLK
HFTVEGVEGVAALGEALSAERFPRLAALSINSCRLGDKQLCALAATLPGM
SRTLKTLSFRSNYALSSVGVSALAEALRAPATATNAGSATTATPTKPGFA
PTAGCPLSCSASAGATTTGAGAPTAKKPLPERAPAWWVPSSSPPPPPPPS
ATNCPRPTAAAAAASAAPARLTIESLDLSYSCWWNRPERAARTGSESSAG
GGGGPFAGLLKILGEGVACPSLRSLRLEGCYL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf