prot_Ecto-sp8_S_contig9446.30971.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9446.30971.1
Unique Nameprot_Ecto-sp8_S_contig9446.30971.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length173
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9446.30971.1 vs. uniprot
Match: A0A6H5JCB9_9PHAE (ENTH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCB9_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 3.590e-53
Identity = 130/172 (75.58%), Postives = 135/172 (78.49%), Query Frame = 0 
Query:    1 MSLLLLLSVCTAASKGLPRSTRRGSMPRSLAKGDAPPVPPTLDKEFSCCSSSGCSAREEGDRMTSTSSRNAPAESEDGRKSRXXXXXXXXXXXXRGASPSSAGVAGAPRXXXXXXXET-AAGTPSRGPSRQRRQHPAAPSASGNHRGGDSGLDLDTDSSFEYDDLDDVWSDE 171
            M LL+LLSVCTAASKGLPRST RGSMP SLAKGDAP VPP LD+E S CSSSGCSAR  GDR T TSSRN PAESEDGRKSR     XXXXXXX               XXXXXXX   AAG PSRGPSRQRRQHPA PSASG+HRGGDSG+DLDTDSSFEYDDLD+VWSDE
Sbjct:   11 MGLLVLLSVCTAASKGLPRSTSRGSMPCSLAKGDAPLVPPALDEETSFCSSSGCSARGGGDRATPTSSRNTPAESEDGRKSRRKSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGKPSRGPSRQRRQHPAVPSASGDHRGGDSGMDLDTDSSFEYDDLDNVWSDE 182
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9446.30971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCB9_9PHAE3.590e-5375.58ENTH domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.635

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9446contigEcto-sp8_S_contig9446:2..1855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9446.30971.1mRNA_Ecto-sp8_S_contig9446.30971.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9446 2..1855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9446.30971.1 ID=prot_Ecto-sp8_S_contig9446.30971.1|Name=mRNA_Ecto-sp8_S_contig9446.30971.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=173bp
MSLLLLLSVCTAASKGLPRSTRRGSMPRSLAKGDAPPVPPTLDKEFSCCS
SSGCSAREEGDRMTSTSSRNAPAESEDGRKSRRKPATTTTTTKTRGASPS
SAGVAGAPRAAAAAAAETAAGTPSRGPSRQRRQHPAAPSASGNHRGGDSG
LDLDTDSSFEYDDLDDVWSDEED
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