prot_Ecto-sp8_S_contig94184.30933.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94184.30933.1
Unique Nameprot_Ecto-sp8_S_contig94184.30933.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length43
Homology
BLAST of mRNA_Ecto-sp8_S_contig94184.30933.1 vs. uniprot
Match: D7FXA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXA2_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.500e-20
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0
Query:    1 EWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLE 41
            EWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLE
Sbjct:   65 EWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLE 105          
BLAST of mRNA_Ecto-sp8_S_contig94184.30933.1 vs. uniprot
Match: A0A6G0XHV2_9STRA (Splicing factor subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHV2_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.960e-15
Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 EWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLE 41
            EWA NQHRD++ASHIGHSD+L YFAVAEN ++GRVR+ +LE
Sbjct:   31 EWAVNQHRDTLASHIGHSDMLAYFAVAENESIGRVRFNMLE 71          
BLAST of mRNA_Ecto-sp8_S_contig94184.30933.1 vs. uniprot
Match: H3G531_PHYRM (Splicing factor subunit n=20 Tax=Oomycota TaxID=4762 RepID=H3G531_PHYRM)

HSP 1 Score: 70.9 bits (172), Expect = 5.090e-15
Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 EWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLE 41
            EWA NQHRD++ASH+GHSD+L YFAVAEN ++GRVRY +LE
Sbjct:   32 EWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLE 72          
BLAST of mRNA_Ecto-sp8_S_contig94184.30933.1 vs. uniprot
Match: A0A1W0A9Q9_9STRA (Splicing factor subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9Q9_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 7.040e-15
Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    1 EWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLE 41
            EWA NQHRD++ASHIGH D+L YFAVAEN ++GRVRY +LE
Sbjct:   31 EWAVNQHRDTLASHIGHKDMLAYFAVAENESIGRVRYAMLE 71          
BLAST of mRNA_Ecto-sp8_S_contig94184.30933.1 vs. uniprot
Match: A0A482SBV5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBV5_9ARCH)

HSP 1 Score: 70.1 bits (170), Expect = 9.020e-15
Identity = 30/42 (71.43%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    1 EWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLEV 42
            EWA NQHRDSIAS +GH+D+L YF++A+N ++GRVRYQLLEV
Sbjct:   31 EWAVNQHRDSIASFVGHADMLSYFSLAQNESIGRVRYQLLEV 72          
BLAST of mRNA_Ecto-sp8_S_contig94184.30933.1 vs. uniprot
Match: A0A3R7ANY8_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7ANY8_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 9.100e-15
Identity = 29/43 (67.44%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    1 EWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLEVT 43
            EWA NQHRD+++SHIGH+D+L YFAVAEN ++GRVR+ +LEV+
Sbjct:   30 EWAVNQHRDTLSSHIGHNDMLSYFAVAENESIGRVRFNMLEVS 72          
BLAST of mRNA_Ecto-sp8_S_contig94184.30933.1 vs. uniprot
Match: A0A662XDD1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XDD1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.240e-14
Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 EWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLE 41
            EWA NQHRD++ASH+GHSD+L +FAVAEN A+GRVRY +LE
Sbjct:   82 EWAVNQHRDTLASHLGHSDMLAFFAVAENEAIGRVRYNMLE 122          
BLAST of mRNA_Ecto-sp8_S_contig94184.30933.1 vs. uniprot
Match: F0W9E9_9STRA (Splicing factor subunit n=2 Tax=Albugo TaxID=65356 RepID=F0W9E9_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.420e-14
Identity = 29/41 (70.73%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 EWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLE 41
            EWA NQHRD++ASHIGH+D+L+YFAVAEN ++ RVRY +LE
Sbjct:   31 EWALNQHRDTLASHIGHADMLLYFAVAENESIARVRYNMLE 71          
BLAST of mRNA_Ecto-sp8_S_contig94184.30933.1 vs. uniprot
Match: A0A8J5IQX8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IQX8_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.450e-14
Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 EWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLE 41
            EWA NQHRD++ASH+GHSD+L YFAVAEN ++GRVRY +LE
Sbjct:   74 EWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLE 114          
BLAST of mRNA_Ecto-sp8_S_contig94184.30933.1 vs. uniprot
Match: A0A662XYC3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYC3_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.280e-14
Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 EWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLE 41
            EWA NQHRD++ASH+GHSD+L +FAVAEN A+GRVRY +LE
Sbjct:  110 EWAVNQHRDTLASHLGHSDMLAFFAVAENEAIGRVRYNMLE 150          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94184.30933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXA2_ECTSI1.500e-20100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6G0XHV2_9STRA4.960e-1573.17Splicing factor subunit n=1 Tax=Aphanomyces euteic... [more]
H3G531_PHYRM5.090e-1573.17Splicing factor subunit n=20 Tax=Oomycota TaxID=47... [more]
A0A1W0A9Q9_9STRA7.040e-1573.17Splicing factor subunit n=1 Tax=Thraustotheca clav... [more]
A0A482SBV5_9ARCH9.020e-1571.43Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A3R7ANY8_9STRA9.100e-1567.44Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A662XDD1_9STRA1.240e-1473.17Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
F0W9E9_9STRA1.420e-1470.73Splicing factor subunit n=2 Tax=Albugo TaxID=65356... [more]
A0A8J5IQX8_9STRA1.450e-1473.17Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A662XYC3_9STRA2.280e-1473.17Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009846Splicing factor 3B subunit 5/RDS3 complex subunit 10PFAMPF07189SF3b10coord: 1..41
e-value: 2.6E-16
score: 59.5
IPR009846Splicing factor 3B subunit 5/RDS3 complex subunit 10PANTHERPTHR20978FAMILY NOT NAMEDcoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94184contigEcto-sp8_S_contig94184:1..129 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94184.30933.1mRNA_Ecto-sp8_S_contig94184.30933.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94184 1..129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94184.30933.1 ID=prot_Ecto-sp8_S_contig94184.30933.1|Name=mRNA_Ecto-sp8_S_contig94184.30933.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=43bp
EWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLEVT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009846SF3b5/RDS3-10