prot_Ecto-sp8_S_contig94023.30907.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94023.30907.1
Unique Nameprot_Ecto-sp8_S_contig94023.30907.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length52
Homology
BLAST of mRNA_Ecto-sp8_S_contig94023.30907.1 vs. uniprot
Match: UPI000C762D11 (eukaryotic translation initiation factor 4E-1A-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C762D11)

HSP 1 Score: 82.4 bits (202), Expect = 5.930e-18
Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    3 ENRDKLGDLVDKMDNVKISENGVA--DPEKIIKHPLQNAWTLWFFKNDKARS 52
            E  DK+GD+VD+MD VKISE+ +    PEK++KHPLQNAWTLWFFKNDKARS
Sbjct:   20 EKLDKMGDIVDQMDKVKISESEICLNGPEKVVKHPLQNAWTLWFFKNDKARS 71          
BLAST of mRNA_Ecto-sp8_S_contig94023.30907.1 vs. uniprot
Match: IF4E_APLCA (Eukaryotic translation initiation factor 4E n=1 Tax=Aplysia californica TaxID=6500 RepID=IF4E_APLCA)

HSP 1 Score: 58.2 bits (139), Expect = 7.690e-9
Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 0
Query:   16 DNVKISENGVADPEKIIKHPLQNAWTLWFFKNDKAR 51
            D  ++ E  V DP+ +IKHPLQN+W +WFFKNDK+R
Sbjct:   17 DEPEVEEERVPDPDMVIKHPLQNSWAMWFFKNDKSR 52          
BLAST of mRNA_Ecto-sp8_S_contig94023.30907.1 vs. uniprot
Match: UPI00065B69BF (eukaryotic translation initiation factor 4E isoform X1 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065B69BF)

HSP 1 Score: 58.2 bits (139), Expect = 1.180e-8
Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 0
Query:   16 DNVKISENGVADPEKIIKHPLQNAWTLWFFKNDKAR 51
            D  ++ E  V DP+ +IKHPLQN+W +WFFKNDK+R
Sbjct:   71 DEPEVEEERVPDPDMVIKHPLQNSWAMWFFKNDKSR 106          
BLAST of mRNA_Ecto-sp8_S_contig94023.30907.1 vs. uniprot
Match: A0A553PRR2_TIGCA (eIF-4F 25 kDa subunit n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PRR2_TIGCA)

HSP 1 Score: 57.4 bits (137), Expect = 1.280e-8
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 0
Query:   11 LVDKMDNVKISENGVADPEKIIKHPLQNAWTLWFFKNDKARS 52
            L +  DN K   N   DPE +IKHPLQN+WTLWF+KND++R+
Sbjct:    9 LTNSKDN-KEQTNSTPDPELLIKHPLQNSWTLWFYKNDRSRN 49          
BLAST of mRNA_Ecto-sp8_S_contig94023.30907.1 vs. uniprot
Match: UPI000CD63644 (eukaryotic translation initiation factor 4E-like n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD63644)

HSP 1 Score: 54.3 bits (129), Expect = 3.950e-8
Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 0
Query:   16 DNVKISENGVADPEKIIKHPLQNAWTLWFFKNDKARS 52
            +NV+ +   V  PE  IKHPLQN W+LWFFKNDK+++
Sbjct:   29 ENVEETNQEVLSPEPYIKHPLQNRWSLWFFKNDKSKT 65          
BLAST of mRNA_Ecto-sp8_S_contig94023.30907.1 vs. uniprot
Match: A0A3B3R131_9TELE (Uncharacterized protein n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3R131_9TELE)

HSP 1 Score: 54.3 bits (129), Expect = 4.120e-8
Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 0
Query:   16 DNVKISENGVADPEKIIKHPLQNAWTLWFFKNDKARS 52
            +NV+ +   V  PE  IKHPLQN W+LWFFKNDK+++
Sbjct:   18 ENVEETNQEVLSPEPYIKHPLQNRWSLWFFKNDKSKT 54          
BLAST of mRNA_Ecto-sp8_S_contig94023.30907.1 vs. uniprot
Match: A0A2C9K1G4_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9K1G4_BIOGL)

HSP 1 Score: 56.2 bits (134), Expect = 4.170e-8
Identity = 22/36 (61.11%), Postives = 26/36 (72.22%), Query Frame = 0
Query:   16 DNVKISENGVADPEKIIKHPLQNAWTLWFFKNDKAR 51
            D  K   + V DPE +IKHPLQN+W +WFFKNDK R
Sbjct:   20 DEEKDDIDDVLDPESVIKHPLQNSWAMWFFKNDKGR 55          
BLAST of mRNA_Ecto-sp8_S_contig94023.30907.1 vs. uniprot
Match: A0A0G2JG98_MOUSE (Eukaryotic translation initiation factor 4E n=10 Tax=Boreoeutheria TaxID=1437010 RepID=A0A0G2JG98_MOUSE)

HSP 1 Score: 53.5 bits (127), Expect = 4.290e-8
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 0
Query:   21 SENGVADPEKIIKHPLQNAWTLWFFKNDKARS 52
            S   VA+PE  IKHPLQN W LWFFKNDK+++
Sbjct:   24 SNQEVANPEHYIKHPLQNRWALWFFKNDKSKT 55          
BLAST of mRNA_Ecto-sp8_S_contig94023.30907.1 vs. uniprot
Match: UPI001EB09185 (eukaryotic translation initiation factor 4E-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB09185)

HSP 1 Score: 56.2 bits (134), Expect = 4.330e-8
Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 0
Query:   18 VKISENGVADPEKIIKHPLQNAWTLWFFKNDKAR 51
            + + ++ VA PE +IKHPLQN W+LWFFKNDK R
Sbjct:   26 IAVVDDAVASPEMLIKHPLQNRWSLWFFKNDKNR 59          
BLAST of mRNA_Ecto-sp8_S_contig94023.30907.1 vs. uniprot
Match: A3KLJ2_STRPU (Eukaryotic translation initiation factor 4E n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A3KLJ2_STRPU)

HSP 1 Score: 56.2 bits (134), Expect = 4.450e-8
Identity = 21/30 (70.00%), Postives = 26/30 (86.67%), Query Frame = 0
Query:   23 NGVADPEKIIKHPLQNAWTLWFFKNDKARS 52
            N V DPE +IKHPLQ+ W++WFFKNDKA+S
Sbjct:   34 NQVVDPESLIKHPLQSRWSMWFFKNDKAKS 63          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94023.30907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C762D115.930e-1871.15eukaryotic translation initiation factor 4E-1A-lik... [more]
IF4E_APLCA7.690e-958.33Eukaryotic translation initiation factor 4E n=1 Ta... [more]
UPI00065B69BF1.180e-858.33eukaryotic translation initiation factor 4E isofor... [more]
A0A553PRR2_TIGCA1.280e-857.14eIF-4F 25 kDa subunit n=1 Tax=Tigriopus californic... [more]
UPI000CD636443.950e-856.76eukaryotic translation initiation factor 4E-like n... [more]
A0A3B3R131_9TELE4.120e-856.76Uncharacterized protein n=1 Tax=Paramormyrops king... [more]
A0A2C9K1G4_BIOGL4.170e-861.11Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
A0A0G2JG98_MOUSE4.290e-865.63Eukaryotic translation initiation factor 4E n=10 T... [more]
UPI001EB091854.330e-861.76eukaryotic translation initiation factor 4E-like n... [more]
A3KLJ2_STRPU4.450e-870.00Eukaryotic translation initiation factor 4E n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10coord: 24..52
e-value: 1.9E-5
score: 26.2
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 25..49
IPR001040Translation Initiation factor eIF- 4ePANTHERPTHR11960EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATEDcoord: 21..51
NoneNo IPR availablePANTHERPTHR11960:SF14EUKARYOTIC TRANSLATION INITIATION FACTOR 4Ecoord: 21..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94023contigEcto-sp8_S_contig94023:447..602 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94023.30907.1mRNA_Ecto-sp8_S_contig94023.30907.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94023 441..602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94023.30907.1 ID=prot_Ecto-sp8_S_contig94023.30907.1|Name=mRNA_Ecto-sp8_S_contig94023.30907.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=52bp
MPENRDKLGDLVDKMDNVKISENGVADPEKIIKHPLQNAWTLWFFKNDKA
RS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023398TIF_eIF4e-like
IPR001040TIF_eIF_4E