prot_Ecto-sp8_S_contig9390.30883.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9390.30883.1
Unique Nameprot_Ecto-sp8_S_contig9390.30883.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length288
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9390.30883.1 vs. uniprot
Match: A0A6H5KJK8_9PHAE (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJK8_9PHAE)

HSP 1 Score: 481 bits (1237), Expect = 1.640e-169
Identity = 247/269 (91.82%), Postives = 251/269 (93.31%), Query Frame = 0 
Query:    1 MSAPPLPDFWTEEKDTKGRTYFSNHRTQETTWERPVASVPQGGPDLPPPYGXXXXXXXXXXXXXXAARSGPCCTPRLTFWISCALGWVIWVFAVAASADDKWAKIDGFDIGAGDEDILDGCDSSDDVCSLYKAFTAMQFIAAVVVSVSMVLFTLALFRPAAGLKCCSVKSLAIAAGSLMMAFAFFEMLAFVLIIVIEKELDGEFSTGFGFGEADLGATFGVAVVAVVLGVVQAVSVLTFARSSGDGPFFKCFNECMAMNNAPNAAAVPT 269
            MSAPPLP+FWTEEKD KGRTYFSNHRTQETTWERPVASVPQ GPDLPPPYG              AARSGPCCTPRLTFWISCALGWVIWVFAVAASADDKWAKIDGFDIGAGDEDILD CDSSDDVCSLYKAFTAMQFIAAVVVSVSMVLFTLALFRPAAGLKCCSVKSLAIAAGSLMMAFAFFEMLAFVLIIVIEKELDGEF+TGFGFGEADLGATFG+AVVAVVLGVVQAVSVLTFARSSGDGPFFKC NECMAMNNAPNAAA+PT
Sbjct:    1 MSAPPLPEFWTEEKDAKGRTYFSNHRTQETTWERPVASVPQRGPDLPPPYGGNAAHCAAVAAPQ-AARSGPCCTPRLTFWISCALGWVIWVFAVAASADDKWAKIDGFDIGAGDEDILDDCDSSDDVCSLYKAFTAMQFIAAVVVSVSMVLFTLALFRPAAGLKCCSVKSLAIAAGSLMMAFAFFEMLAFVLIIVIEKELDGEFNTGFGFGEADLGATFGLAVVAVVLGVVQAVSVLTFARSSGDGPFFKCLNECMAMNNAPNAAAIPT 268
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9390.30883.1 vs. uniprot
Match: A0A6H5L0F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0F7_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 5.310e-41
Identity = 92/223 (41.26%), Postives = 129/223 (57.85%), Query Frame = 0 
Query:   73 CTPRLTFWISCALGWVIWVFAVAASADDKWAKIDGFD--IGAGDEDILDGCDSSDD-----------------VCSLYKAFTAMQFIAAVVVSVSMVLFTLALFRPAAGLKCCSVKSLAIAAGSLMMAFAFFEMLAFVLIIVIEKELDG--------------EFSTGFGFG-EADLGATFGVAVVAVVLGVVQAVSVLTFARSSGDGPFFKCFNECMAMNNA 261
            CTPRLTFW+  A  W++W+FAV+A+ADDKW K +G    + AG++ +L+ CD  DD                 +C LY+AFTAMQ +A +V SVS++L  LA FRP AG KC S ++LA   G+LM  +A F+++A VL  V+ +E D                F T F  G EA++G TFGV V A++L V+  V +   A  +GDGP +KC +  M  N +
Sbjct:   18 CTPRLTFWVIAASSWLVWIFAVSAAADDKWIKDNGQGDWLAAGEDPVLNLCDGLDDAADDDLLATDEYKDFVSICDLYRAFTAMQMLATIVCSVSVLLLALAFFRPEAG-KCASTRTLAFVGGALMATYALFQLVAVVLAAVLAQEFDNLPNDDDTSYLSGYDGFYTFFEAGYEAEVGPTFGVGVTALILAVIMTVVLCLCATRTGDGPLYKCCHSLMLANKS 239
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9390.30883.1 vs. uniprot
Match: A0A6H5JD07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD07_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 3.040e-10
Identity = 44/101 (43.56%), Postives = 59/101 (58.42%), Query Frame = 0 
Query:   90 WVFAVAASADDKWAKIDGFDIGAGDEDILDGCDSSDDVCSLYKAFTAMQFIAAVVVSVSMVLFTLALFRPAAGLKCCSVKSLAIAAGSLMMAFAFFEMLAF 190
            W+FAVAA+ADD W   D ++ G G+      CD  D  C LYKA TA Q++A +VVSV +V+  +A F PA          L +A G ++  FA FE+LAF
Sbjct:   21 WIFAVAAAADDAWIA-DAYEAGLGES-----CDGYD-FCGLYKAATAFQYLATIVVSVVLVMVVVAAFTPAP-----VTGKLGLAVGIMLFVFAVFELLAF 109
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9390.30883.1 vs. uniprot
Match: A0A6P8UT60_GYMAC (HECT-type E3 ubiquitin transferase n=1 Tax=Gymnodraco acuticeps TaxID=8218 RepID=A0A6P8UT60_GYMAC)

HSP 1 Score: 57.0 bits (136), Expect = 1.910e-5
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0 
Query:    1 MSAPPLPDFWTEEKDTKGRTYFSNHRTQETTWERPVASVPQGG 43
            ++ P LP  W E KD KGRTYF NH ++ TTW RP+  + +GG
Sbjct:  386 LTTPGLPPGWEERKDGKGRTYFVNHNSRNTTWTRPIVQLTEGG 428
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9390.30883.1 vs. uniprot
Match: UPI00146AE23F (E3 ubiquitin-protein ligase NEDD4-like isoform X13 n=1 Tax=Pseudochaenichthys georgianus TaxID=52239 RepID=UPI00146AE23F)

HSP 1 Score: 57.0 bits (136), Expect = 1.910e-5
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0 
Query:    1 MSAPPLPDFWTEEKDTKGRTYFSNHRTQETTWERPVASVPQGG 43
            ++ P LP  W E KD KGRTYF NH ++ TTW RP+  + +GG
Sbjct:  386 LTTPGLPPGWEERKDGKGRTYFVNHNSRNTTWTRPIVQLTEGG 428
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9390.30883.1 vs. uniprot
Match: A0A6P8V3U2_GYMAC (HECT-type E3 ubiquitin transferase n=1 Tax=Gymnodraco acuticeps TaxID=8218 RepID=A0A6P8V3U2_GYMAC)

HSP 1 Score: 57.0 bits (136), Expect = 1.910e-5
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0 
Query:    1 MSAPPLPDFWTEEKDTKGRTYFSNHRTQETTWERPVASVPQGG 43
            ++ P LP  W E KD KGRTYF NH ++ TTW RP+  + +GG
Sbjct:  387 LTTPGLPPGWEERKDGKGRTYFVNHNSRNTTWTRPIVQLTEGG 429
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9390.30883.1 vs. uniprot
Match: A0A6P8UQY9_GYMAC (HECT-type E3 ubiquitin transferase n=1 Tax=Gymnodraco acuticeps TaxID=8218 RepID=A0A6P8UQY9_GYMAC)

HSP 1 Score: 57.0 bits (136), Expect = 1.920e-5
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0 
Query:    1 MSAPPLPDFWTEEKDTKGRTYFSNHRTQETTWERPVASVPQGG 43
            ++ P LP  W E KD KGRTYF NH ++ TTW RP+  + +GG
Sbjct:  386 LTTPGLPPGWEERKDGKGRTYFVNHNSRNTTWTRPIVQLTEGG 428
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9390.30883.1 vs. uniprot
Match: A0A6P8UV64_GYMAC (HECT-type E3 ubiquitin transferase n=1 Tax=Gymnodraco acuticeps TaxID=8218 RepID=A0A6P8UV64_GYMAC)

HSP 1 Score: 57.0 bits (136), Expect = 1.920e-5
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0 
Query:    1 MSAPPLPDFWTEEKDTKGRTYFSNHRTQETTWERPVASVPQGG 43
            ++ P LP  W E KD KGRTYF NH ++ TTW RP+  + +GG
Sbjct:  387 LTTPGLPPGWEERKDGKGRTYFVNHNSRNTTWTRPIVQLTEGG 429
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9390.30883.1 vs. uniprot
Match: UPI00146EE298 (E3 ubiquitin-protein ligase NEDD4-like isoform X11 n=2 Tax=Pseudochaenichthys georgianus TaxID=52239 RepID=UPI00146EE298)

HSP 1 Score: 57.0 bits (136), Expect = 1.920e-5
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0 
Query:    1 MSAPPLPDFWTEEKDTKGRTYFSNHRTQETTWERPVASVPQGG 43
            ++ P LP  W E KD KGRTYF NH ++ TTW RP+  + +GG
Sbjct:  387 LTTPGLPPGWEERKDGKGRTYFVNHNSRNTTWTRPIVQLTEGG 429
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9390.30883.1 vs. uniprot
Match: A0A6P8VW16_GYMAC (HECT-type E3 ubiquitin transferase n=1 Tax=Gymnodraco acuticeps TaxID=8218 RepID=A0A6P8VW16_GYMAC)

HSP 1 Score: 57.0 bits (136), Expect = 1.920e-5
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0 
Query:    1 MSAPPLPDFWTEEKDTKGRTYFSNHRTQETTWERPVASVPQGG 43
            ++ P LP  W E KD KGRTYF NH ++ TTW RP+  + +GG
Sbjct:  399 LTTPGLPPGWEERKDGKGRTYFVNHNSRNTTWTRPIVQLTEGG 441
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9390.30883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5KJK8_9PHAE1.640e-16991.82WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A6H5L0F7_9PHAE5.310e-4141.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD07_9PHAE3.040e-1043.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6P8UT60_GYMAC1.910e-551.16HECT-type E3 ubiquitin transferase n=1 Tax=Gymnodr... [more]
UPI00146AE23F1.910e-551.16E3 ubiquitin-protein ligase NEDD4-like isoform X13... [more]
A0A6P8V3U2_GYMAC1.910e-551.16HECT-type E3 ubiquitin transferase n=1 Tax=Gymnodr... [more]
A0A6P8UQY9_GYMAC1.920e-551.16HECT-type E3 ubiquitin transferase n=1 Tax=Gymnodr... [more]
A0A6P8UV64_GYMAC1.920e-551.16HECT-type E3 ubiquitin transferase n=1 Tax=Gymnodr... [more]
UPI00146EE2981.920e-551.16E3 ubiquitin-protein ligase NEDD4-like isoform X11... [more]
A0A6P8VW16_GYMAC1.920e-551.16HECT-type E3 ubiquitin transferase n=1 Tax=Gymnodr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 5..37
e-value: 9.1E-9
score: 45.1
IPR001202WW domainPFAMPF00397WWcoord: 6..35
e-value: 9.8E-8
score: 32.0
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 10..35
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 4..37
score: 16.333
NoneNo IPR availableGENE3D2.20.70.10coord: 1..40
e-value: 6.3E-13
score: 50.0
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 171..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..170
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 241..288
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 216..240
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 197..215
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 215..237
NoneNo IPR availableTMHMMTMhelixcoord: 77..96
NoneNo IPR availableTMHMMTMhelixcoord: 173..195
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 2..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9390contigEcto-sp8_S_contig9390:2499..6858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9390.30883.1mRNA_Ecto-sp8_S_contig9390.30883.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9390 2499..6858 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9390.30883.1 ID=prot_Ecto-sp8_S_contig9390.30883.1|Name=mRNA_Ecto-sp8_S_contig9390.30883.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=288bp
MSAPPLPDFWTEEKDTKGRTYFSNHRTQETTWERPVASVPQGGPDLPPPY
GGNAAPRAAAAPPQQAARSGPCCTPRLTFWISCALGWVIWVFAVAASADD
KWAKIDGFDIGAGDEDILDGCDSSDDVCSLYKAFTAMQFIAAVVVSVSMV
LFTLALFRPAAGLKCCSVKSLAIAAGSLMMAFAFFEMLAFVLIIVIEKEL
DGEFSTGFGFGEADLGATFGVAVVAVVLGVVQAVSVLTFARSSGDGPFFK
CFNECMAMNNAPNAAAVPTQQQQQQQQPPQQQQQPVRS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf