prot_Ecto-sp8_S_contig93759.30861.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig93759.30861.1
Unique Nameprot_Ecto-sp8_S_contig93759.30861.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length39
Homology
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BLAST of mRNA_Ecto-sp8_S_contig93759.30861.1 vs. uniprot
Match: D8LNU5_ECTSI (S5A_REDUCTASE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNU5_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 1.770e-5
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 0 
Query:   12 SAAAWTYLALHGSYGYLWIVKVRKY 36
            SAAAWTYLALHGSYGYLWIVK + +
Sbjct:   49 SAAAWTYLALHGSYGYLWIVKDQTF 73
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig93759.30861.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNU5_ECTSI1.770e-584.00S5A_REDUCTASE domain-containing protein n=2 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig93759contigEcto-sp8_S_contig93759:31..147 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig93759.30861.1mRNA_Ecto-sp8_S_contig93759.30861.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig93759 31..147 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig93759.30861.1 ID=prot_Ecto-sp8_S_contig93759.30861.1|Name=mRNA_Ecto-sp8_S_contig93759.30861.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=39bp
MLRVSAHVTWGSAAAWTYLALHGSYGYLWIVKVRKYLQ*
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