prot_Ecto-sp8_S_contig9368.30849.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9368.30849.1
Unique Nameprot_Ecto-sp8_S_contig9368.30849.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length108
Homology
BLAST of mRNA_Ecto-sp8_S_contig9368.30849.1 vs. uniprot
Match: D7FPL9_ECTSI (Polyribonucleotide nucleotidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPL9_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 6.500e-54
Identity = 98/107 (91.59%), Postives = 99/107 (92.52%), Query Frame = 0
Query:    1 HNTLQGDCYEGTVKTVHEYGCLVELLRNQQGLLHVSNMTDKLPAPPARDIVKVGDTVDVRVMEVDRLRGLIKLASESHLSSSTSKPGQGGRSPTVAGEDEEMQKASQ 107
            H   +GD YEGTV TVHEYGCLVELLRNQQGLLHVSNMTDKLPAPPARDIVKVGDTV VRVMEVDRLRGLIKLASESH SSSTSKPGQG RSPTVAGEDEEMQKASQ
Sbjct:  657 HEIEEGDFYEGTVTTVHEYGCLVELLRNQQGLLHVSNMTDKLPAPPARDIVKVGDTVGVRVMEVDRLRGLIKLASESHPSSSTSKPGQGRRSPTVAGEDEEMQKASQ 763          
BLAST of mRNA_Ecto-sp8_S_contig9368.30849.1 vs. uniprot
Match: B8C7U5_THAPS (Polyribonucleotide nucleotidyltransferase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7U5_THAPS)

HSP 1 Score: 68.9 bits (167), Expect = 2.280e-11
Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    5 QGDCYEGTVKTVHEYGCLVELLRNQQGLLHVSNMTDKLPAPPA------RDIVKVGDTVDVRVMEVDRLRGLIKLASESHLSSSTSK 85
            +G  YEGTV  + ++G +VELLRN++GLLHVS + DK    P       RD +KVGD ++V   ++D ++G IKL+ +  L    SK
Sbjct:  571 EGGVYEGTVIEIKDFGAVVELLRNKEGLLHVSELADKTEKHPEGNMGLLRDHLKVGDKIEVLCTKIDHVQGSIKLSRKKLLQMRESK 657          
BLAST of mRNA_Ecto-sp8_S_contig9368.30849.1 vs. uniprot
Match: A0A7S3PD14_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD14_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 8.640e-11
Identity = 33/83 (39.76%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    5 QGDCYEGTVKTVHEYGCLVELLRNQQGLLHVSNMTDKLPAPP--------ARDIVKVGDTVDVRVMEVDRLRGLIKLASESHL 79
            +G+ YEGT+  + ++G +VELLRN++ LLHVS +TD+              RD +KVG T+DV+ + VD ++G IK++ ++ L
Sbjct:  133 EGEIYEGTIVELKDFGAVVELLRNKEALLHVSELTDESEVKDHPEGIAGFVRDNLKVGQTIDVQCIGVDPIQGSIKVSRKAAL 215          
BLAST of mRNA_Ecto-sp8_S_contig9368.30849.1 vs. uniprot
Match: A0A3A4ZJQ9_9BACT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Candidatus Microgenomates bacterium TaxID=2093373 RepID=A0A3A4ZJQ9_9BACT)

HSP 1 Score: 66.6 bits (161), Expect = 1.490e-10
Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 0
Query:    6 GDCYEGTVKTVHEYGCLVELLRNQQGLLHVSNMTDKLPAPPARDIVKVGDTVDVRVMEVDRLRGLIKLA 74
            G+ YEG VK +  +G  VE+L NQ GLLHVS+M+++  A P  D+VK+GD V VRV E+D L G I L+
Sbjct:  620 GEIYEGEVKRMQSFGAFVEVLPNQDGLLHVSDMSEEYVANP-EDVVKLGDHVTVRVKEIDSL-GRINLS 686          
BLAST of mRNA_Ecto-sp8_S_contig9368.30849.1 vs. uniprot
Match: A0A3S2U051_9BURK (RNA-binding transcriptional accessory protein n=1 Tax=Rubrivivax albus TaxID=2499835 RepID=A0A3S2U051_9BURK)

HSP 1 Score: 65.5 bits (158), Expect = 3.810e-10
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 0
Query:    6 GDCYEGTVKTVHEYGCLVELLRNQQGLLHVSNMTDKLPAPPARDIVKVGDTVDVRVMEVDRLRGLIKLASESHLSSSTSKPGQGGRSP-TVAGEDE 100
            G   +GTV  V ++G  V+L  +Q GL+HVS +++K  +  AR++VK GD V VRV+EVD  RG I L  +  L ++  KPG GG +    AG DE
Sbjct:  657 GMVLQGTVSNVAQFGAFVDLGVHQDGLVHVSQLSNKFVSD-AREVVKTGDVVKVRVLEVDLQRGRISLTMK--LDAAAPKPGAGGDNRYRAAGRDE 749          
BLAST of mRNA_Ecto-sp8_S_contig9368.30849.1 vs. uniprot
Match: A0A133YXT4_9FIRM (Polyribonucleotide nucleotidyltransferase n=1 Tax=Tissierellia bacterium KA00581 TaxID=1588751 RepID=A0A133YXT4_9FIRM)

HSP 1 Score: 64.7 bits (156), Expect = 7.040e-10
Identity = 32/74 (43.24%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    6 GDCYEGTVKTVHEYGCLVELLRNQQGLLHVSNMTDKLPAPPARDIVKVGDTVDVRVMEVDRLRGLIKLASESHL 79
            G+ Y+G + T+  +G  VEL++ ++GLLH+SNMT +       D+ KVGD VDV+V+E+D  +G IKL+ ++ L
Sbjct:  621 GEVYKGVITTITNFGAFVELIKGKEGLLHISNMTHER-LNKVEDLFKVGDLVDVKVIEIDN-QGKIKLSRKALL 692          
BLAST of mRNA_Ecto-sp8_S_contig9368.30849.1 vs. uniprot
Match: A0A836CCD4_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCD4_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.870e-9
Identity = 29/72 (40.28%), Postives = 48/72 (66.67%), Query Frame = 0
Query:    6 GDCYEGTVKTVHEYGCLVELLRNQQGLLHVSNMTDKLPAPPARDIVKVGDTVDVRVMEVDRLRGLIKLASES 77
            GD   GTV  + ++G +VE+LR + G+LHVS ++ +  + P   ++ VG  + V+ +EVD LRGLIKL+ ++
Sbjct:  717 GDVMTGTVTEIRDFGAMVEVLRGRLGVLHVSEVSHQSGSRPVTSLLTVGQKLQVKALEVDPLRGLIKLSRKA 788          
BLAST of mRNA_Ecto-sp8_S_contig9368.30849.1 vs. uniprot
Match: A0A072YNP9_CLONO (S1 motif domain-containing protein n=13 Tax=Clostridiaceae TaxID=31979 RepID=A0A072YNP9_CLONO)

HSP 1 Score: 63.2 bits (152), Expect = 2.450e-9
Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 0
Query:   11 GTVKTVHEYGCLVELLRNQQGLLHVSNMTDKLPAPPARDIVKVGDTVDVRVMEVDRLRGLIKLA 74
            GTV+ V ++G  V++  +Q GL+H+S ++DK    P  DIVKVGD V+VRV+EVD  RG I L+
Sbjct:  653 GTVRNVADFGAFVDIGVHQDGLVHISQLSDKFVKNPL-DIVKVGDIVEVRVLEVDEKRGRISLS 715          
BLAST of mRNA_Ecto-sp8_S_contig9368.30849.1 vs. uniprot
Match: A0A6L8IEQ0_9GAMM (Polyribonucleotide nucleotidyltransferase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A6L8IEQ0_9GAMM)

HSP 1 Score: 63.2 bits (152), Expect = 2.470e-9
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 0
Query:    6 GDCYEGTVKTVHEYGCLVELLRNQQGLLHVSNMTDKLPAPPARDIVKVGDTVDVRVMEVDRLRGLIKL 73
            G  YEGTV +V +YG  V +L    GL+H+S M+D+       D+VKVGD+V VRVMEVD  RG I+L
Sbjct:  715 GKVYEGTVSSVMDYGAFVTVLPGTDGLVHISQMSDRR-IERTSDVVKVGDSVSVRVMEVDG-RGRIRL 780          
BLAST of mRNA_Ecto-sp8_S_contig9368.30849.1 vs. uniprot
Match: A0A7V6I1M4_9BACT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V6I1M4_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 3.340e-9
Identity = 32/86 (37.21%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    6 GDCYEGTVKTVHEYGCLVELLRNQQGLLHVSNMTDKLPAPPARDIVKVGDTVDVRVMEVDRLRGLIKLASESHLSSSTSKPGQGGR 91
            G+ Y G VKT+ ++G  VE+L N+ GLLH+S M D        D+ KVGD V+V+++++D+  G ++L+ ++ L     +  QG R
Sbjct:  630 GEVYVGKVKTIVQFGAFVEILPNKDGLLHISEM-DWKKTEKVEDLFKVGDEVEVKLIDIDQKTGKLRLSRKALLPRPPKESNQGNR 714          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9368.30849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPL9_ECTSI6.500e-5491.59Polyribonucleotide nucleotidyltransferase n=2 Tax=... [more]
B8C7U5_THAPS2.280e-1142.53Polyribonucleotide nucleotidyltransferase (Fragmen... [more]
A0A7S3PD14_9STRA8.640e-1139.76Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A3A4ZJQ9_9BACT1.490e-1052.17Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A3S2U051_9BURK3.810e-1043.75RNA-binding transcriptional accessory protein n=1 ... [more]
A0A133YXT4_9FIRM7.040e-1043.24Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A836CCD4_9STRA1.870e-940.28Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A072YNP9_CLONO2.450e-950.00S1 motif domain-containing protein n=13 Tax=Clostr... [more]
A0A6L8IEQ0_9GAMM2.470e-951.47Polyribonucleotide nucleotidyltransferase n=3 Tax=... [more]
A0A7V6I1M4_9BACT3.340e-937.21Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 4..76
e-value: 7.7E-10
score: 48.7
NoneNo IPR availableGENE3D2.40.50.140coord: 5..77
e-value: 1.2E-16
score: 62.3
NoneNo IPR availablePANTHERPTHR10724S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1coord: 5..73
NoneNo IPR availablePANTHERPTHR10724:SF730S RIBOSOMAL PROTEIN S1, CHLOROPLASTICcoord: 5..73
IPR003029S1 domainPFAMPF00575S1coord: 6..72
e-value: 1.0E-11
score: 45.0
IPR003029S1 domainPROSITEPS50126S1coord: 6..76
score: 17.546
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 4..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9368contigEcto-sp8_S_contig9368:5986..6765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9368.30849.1mRNA_Ecto-sp8_S_contig9368.30849.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9368 5986..6765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9368.30849.1 ID=prot_Ecto-sp8_S_contig9368.30849.1|Name=mRNA_Ecto-sp8_S_contig9368.30849.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=108bp
HNTLQGDCYEGTVKTVHEYGCLVELLRNQQGLLHVSNMTDKLPAPPARDI
VKVGDTVDVRVMEVDRLRGLIKLASESHLSSSTSKPGQGGRSPTVAGEDE
EMQKASQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR003029S1_domain
IPR012340NA-bd_OB-fold