prot_Ecto-sp8_S_contig9364.30843.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9364.30843.1
Unique Nameprot_Ecto-sp8_S_contig9364.30843.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length170
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9364.30843.1 vs. uniprot
Match: A0A6H5L374_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L374_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 2.060e-121
Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 0 
Query:    1 MKRRLHELGANPARLAACLEKDECVSLMMGSMLLSRDGLLRQKGQLPAWLSRVRGWRWSFHFADKDAKRQWMTMEDLARTPWMMNFPGHVSSAVPPPPLLAVRCEFHRDFTYTDAGFHQDGLVWHFEDNHRFVKVSNYPALEVERDEKSWGWRLVNAHVTFKQERALPP 169
            MKRRLHELGANPARLAACLEKDECVSLMMGSMLLSRDGLLRQKGQLPAWLSRVRGWRWSFHFADKDAKRQWMTMEDLARTPWMM+FPGHVSSAVPPPPLLAVRCEFHRDFTYTDAGFHQDGLVWHFEDNH FVKVSNYPALEVERDEKSWGWRL+NAHVTF+Q+RALPP
Sbjct:  246 MKRRLHELGANPARLAACLEKDECVSLMMGSMLLSRDGLLRQKGQLPAWLSRVRGWRWSFHFADKDAKRQWMTMEDLARTPWMMSFPGHVSSAVPPPPLLAVRCEFHRDFTYTDAGFHQDGLVWHFEDNHHFVKVSNYPALEVERDEKSWGWRLINAHVTFQQDRALPP 414
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9364.30843.1 vs. uniprot
Match: D8LLT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT4_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 6.240e-38
Identity = 83/171 (48.54%), Postives = 93/171 (54.39%), Query Frame = 0 
Query:    1 MKRRLHELGANPARLAACLEKDECVSL--MMGSMLLSRDGLLRQKGQLPAWLSRVRGWRWSFHFADKDAKRQWMTMEDLARTPWMMNFPGHVSSAVPPPPLLAVRCEFHRDFTYTDAGFHQDGLVWHFEDNHRFVKVSNYPALEVERDEKSWGWRLVNAHVTFKQERALPP 169
            MKRRLHELGANPARLAACLEK   +        + L+ +GL  +   LP  L                            R   + +  G   +A+                     GFHQDGLVWHFEDNHRFVKVSNYPALEVERDEKSWGWRLVNAHVTFKQERA+PP
Sbjct:    6 MKRRLHELGANPARLAACLEKGRPLEAEGTAAGVALAGEGLAVE---LPLLLQ--------------------------GRQAAVDDHGGPGKNAL--------------------DGFHQDGLVWHFEDNHRFVKVSNYPALEVERDEKSWGWRLVNAHVTFKQERAVPP 127
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9364.30843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L374_9PHAE2.060e-12197.04F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LLT4_ECTSI6.240e-3848.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9364contigEcto-sp8_S_contig9364:9..3793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9364.30843.1mRNA_Ecto-sp8_S_contig9364.30843.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9364 3..3793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9364.30843.1 ID=prot_Ecto-sp8_S_contig9364.30843.1|Name=mRNA_Ecto-sp8_S_contig9364.30843.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=170bp
MKRRLHELGANPARLAACLEKDECVSLMMGSMLLSRDGLLRQKGQLPAWL
SRVRGWRWSFHFADKDAKRQWMTMEDLARTPWMMNFPGHVSSAVPPPPLL
AVRCEFHRDFTYTDAGFHQDGLVWHFEDNHRFVKVSNYPALEVERDEKSW
GWRLVNAHVTFKQERALPP*
back to top