prot_Ecto-sp8_S_contig936.30833.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig936.30833.1
Unique Nameprot_Ecto-sp8_S_contig936.30833.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length184
Homology
BLAST of mRNA_Ecto-sp8_S_contig936.30833.1 vs. uniprot
Match: D8LH40_ECTSI (ACT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH40_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 4.150e-111
Identity = 178/183 (97.27%), Postives = 179/183 (97.81%), Query Frame = 0
Query:    1 MSDLVAPTPARAGEAPGVAAAAGXXXXXXXXVGGGARPAVAELAGETASPPPATFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQRLKVDYTLMTIGAANTGVMEQALQELAGRYKMEWSITYRNRKQKVAILVSKDDHCLYDLLIRHRSGELDCVVSTIISNHDKLR 183
            MSDLVAPTPARAGEAPGVAAA    XXXXXXVGGGARPAVAELAGETASPPPATFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQRLKVDYTLMTIGAANTGVMEQAL+ELAGRYKMEWSITYRNRKQKVAILVSKDDHCLYDLLIRHRSGELDCVVSTIISNHDKLR
Sbjct:    1 MSDLVAPTPARAGEAPGVAAA----XXXXXXVGGGARPAVAELAGETASPPPATFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQRLKVDYTLMTIGAANTGVMEQALRELAGRYKMEWSITYRNRKQKVAILVSKDDHCLYDLLIRHRSGELDCVVSTIISNHDKLR 179          
BLAST of mRNA_Ecto-sp8_S_contig936.30833.1 vs. uniprot
Match: A0A8J4BZK0_9CHLO (ACT domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4BZK0_9CHLO)

HSP 1 Score: 171 bits (432), Expect = 1.130e-48
Identity = 83/151 (54.97%), Postives = 112/151 (74.17%), Query Frame = 0
Query:   35 GARPAVAELAGETASPPPA--TFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQRLKVDYTLMTIGAANTGVMEQALQELAGRYKMEWSITYRNRKQKVAILVSKDDHCLYDLLIRHRSGELDCVVSTIISNHDKLR 183
            GA P+ + +A   A  PPA  + TA + ++CPDQ GV+AAV+ LL+G+G NI+ +DQF+DPSS ++FQR+  DY  + IG  N  V+E+A+ ELA RY M+W I+Y+N+ +K+AILVSK DHCLYDLLIRHRSGEL C +  IISNH  L+
Sbjct:   60 GAAPSPSPVASGIADAPPAQTSLTANLLLQCPDQKGVIAAVSQLLYGFGCNIIASDQFSDPSSGMFFQRITFDYIDIVIGPGNMSVLERAIGELAARYSMKWQISYKNKVKKMAILVSKQDHCLYDLLIRHRSGELRCHIPLIISNHPDLK 210          
BLAST of mRNA_Ecto-sp8_S_contig936.30833.1 vs. uniprot
Match: A0A836C2F7_9CHLO (ACT domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C2F7_9CHLO)

HSP 1 Score: 160 bits (405), Expect = 1.130e-44
Identity = 74/133 (55.64%), Postives = 101/133 (75.94%), Query Frame = 0
Query:   51 PPATFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQRLKVDYTLMTIGAANTGVMEQALQELAGRYKMEWSITYRNRKQKVAILVSKDDHCLYDLLIRHRSGELDCVVSTIISNHDKLR 183
            P A  TA + ++CPDQ GV+AAV+ LL+G+G NIV +DQFTD  S  +FQR+  D++ + IG  NT V+E+A+ ELA R++M+W + Y+N+ +++AILVSK DHCLYDLLIRHRSGEL C +  IISNH  L+
Sbjct:   78 PQAGLTANLLLQCPDQKGVIAAVSQLLYGFGCNIVSSDQFTDSISNQFFQRITFDFSEIVIGPGNTAVLERAIGELASRFRMKWKLAYKNKIKRLAILVSKQDHCLYDLLIRHRSGELRCEIPFIISNHPDLK 210          
BLAST of mRNA_Ecto-sp8_S_contig936.30833.1 vs. uniprot
Match: A0A835WEU7_CHLIN (ACT domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WEU7_CHLIN)

HSP 1 Score: 160 bits (404), Expect = 1.480e-44
Identity = 72/129 (55.81%), Postives = 100/129 (77.52%), Query Frame = 0
Query:   55 FTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQRLKVDYTLMTIGAANTGVMEQALQELAGRYKMEWSITYRNRKQKVAILVSKDDHCLYDLLIRHRSGELDCVVSTIISNHDKLR 183
             +A + + CPDQ GV+AAV+ LL+G+G NIV +DQFTD SS+++FQR+  D++ + IG  NT V+E+A+ ELA R+ M+W I Y+N+ +++A+LVSK DHCLYDLLIRHRSGEL C +  IISNH  L+
Sbjct:   79 LSANLLLICPDQKGVIAAVSQLLYGFGCNIVASDQFTDSSSSMFFQRITFDFSEIVIGPGNTAVLERAIAELANRFNMKWKIAYKNKVKRMAVLVSKQDHCLYDLLIRHRSGELRCEIPFIISNHPDLK 207          
BLAST of mRNA_Ecto-sp8_S_contig936.30833.1 vs. uniprot
Match: A0A836B620_9CHLO (ACT domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B620_9CHLO)

HSP 1 Score: 159 bits (403), Expect = 2.390e-44
Identity = 72/129 (55.81%), Postives = 100/129 (77.52%), Query Frame = 0
Query:   55 FTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQRLKVDYTLMTIGAANTGVMEQALQELAGRYKMEWSITYRNRKQKVAILVSKDDHCLYDLLIRHRSGELDCVVSTIISNHDKLR 183
             +A + + CPDQ GV+AAV+ LL+G+G NIV +DQFTD SS+++FQR+  D++ + IG  NT V+E+A+ ELA R+ M+W I+Y N+ +++A+LVSK DHCLYDLLIRHRSGEL C +  IISNH  L+
Sbjct:   85 LSANLLLICPDQKGVIAAVSQLLYGFGCNIVASDQFTDSSSSMFFQRITFDFSEIVIGPGNTAVLERAIAELANRFNMKWKISYTNKVKRMAVLVSKQDHCLYDLLIRHRSGELRCEIPLIISNHPDLK 213          
BLAST of mRNA_Ecto-sp8_S_contig936.30833.1 vs. uniprot
Match: A8IBF9_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IBF9_CHLRE)

HSP 1 Score: 155 bits (391), Expect = 2.090e-43
Identity = 70/122 (57.38%), Postives = 94/122 (77.05%), Query Frame = 0
Query:   62 KCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQRLKVDYTLMTIGAANTGVMEQALQELAGRYKMEWSITYRNRKQKVAILVSKDDHCLYDLLIRHRSGELDCVVSTIISNHDKLR 183
             CPDQ GV+AAV+ LL+G+G NIV +DQFTD SS ++FQR+  D++ + IG  NT V+E+A+ ELA R+ M+W I Y+N+ +++A+LVSK DHCLYDLLIR RSGEL C +  IISNH  L+
Sbjct:   11 SCPDQKGVIAAVSQLLYGFGCNIVASDQFTDSSSGMFFQRITFDFSEIVIGPGNTAVLERAIAELANRFNMKWKIAYKNKVKRMAVLVSKQDHCLYDLLIRLRSGELRCEIPFIISNHPDLK 132          
BLAST of mRNA_Ecto-sp8_S_contig936.30833.1 vs. uniprot
Match: A0A7S0RP56_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RP56_9CHLO)

HSP 1 Score: 157 bits (396), Expect = 3.180e-43
Identity = 71/139 (51.08%), Postives = 108/139 (77.70%), Query Frame = 0
Query:   45 GETASPPPATFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQRLKVDYTLMTIGAANTGVMEQALQELAGRYKMEWSITYRNRKQKVAILVSKDDHCLYDLLIRHRSGELDCVVSTIISNHDKLR 183
            G  AS P  T +A + ++CPD  GVVAA++ LL+G+G NIV +DQFTD  + ++FQR++ D++ + IG  NT V+E+A+ ELA R++M+W+++Y+++++++A+LVSK DHCLYDLLIRH+SGEL C +  IISNH  L+
Sbjct:   84 GGAASGPSKTTSATLLLQCPDTKGVVAALSQLLYGFGCNIVSSDQFTDTDTNMFFQRIEFDFSDLIIGPGNTSVLERAIAELARRFEMKWTVSYQSKRKRLALLVSKLDHCLYDLLIRHKSGELFCDIPIIISNHPDLK 222          
BLAST of mRNA_Ecto-sp8_S_contig936.30833.1 vs. uniprot
Match: A0A5J4Y4F6_9CHLO (Formyltetrahydrofolate deformylase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y4F6_9CHLO)

HSP 1 Score: 154 bits (389), Expect = 2.850e-42
Identity = 74/126 (58.73%), Postives = 96/126 (76.19%), Query Frame = 0
Query:   57 AVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQRLKVDYTLMTIGAANTGVMEQALQELAGRYKMEWSITYRNRKQKVAILVSKDDHCLYDLLIRHRSGELDCVVSTIISNHDKL 182
            A + I+CPDQ GVVAA+A LL+G+G NI+E+DQ+TD ++  YFQR++ DY+   +G  NT V+E A+ ELA RY+MEW I Y N+ ++VAILVSK DHCLYDLLIR ++GEL C V  IISNH  L
Sbjct:   84 ASLLIQCPDQKGVVAALAQLLYGFGCNILESDQYTDQTTGTYFQRIRFDYSECLVGPTNTQVLEHAVGELAMRYEMEWRIYYDNKVKRVAILVSKLDHCLYDLLIRLKAGELSCQVPVIISNHPDL 209          
BLAST of mRNA_Ecto-sp8_S_contig936.30833.1 vs. uniprot
Match: A0A7S0VLY8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0VLY8_9CHLO)

HSP 1 Score: 142 bits (358), Expect = 1.040e-38
Identity = 65/139 (46.76%), Postives = 98/139 (70.50%), Query Frame = 0
Query:   47 TASPPP---ATFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQRLKVDYTLMTIGAANTGVMEQALQELAGRYKMEWSITYRNRKQKVAILVSKDDHCLYDLLIRHRSGELDCVVSTIISNHDKL 182
            T+ PPP    ++ A + ++CPD+ GV+AAV  LL+G+G NI+ +DQ  D    ++FQR+  DY+ + +G  N  ++E+A+ ELA R+KM W I+YR R +++A+LVSK+ HCLYD+LIRH+S EL C +  +ISNH  L
Sbjct:   75 TSHPPPNEGKSYQATLLLQCPDRQGVIAAVTQLLYGFGCNIITSDQCKDFGYNIFFQRIAFDYSELVVGPGNVVLLERAIAELAQRFKMTWRISYRERLKRLAVLVSKEPHCLYDILIRHQSKELHCEIPIVISNHADL 213          
BLAST of mRNA_Ecto-sp8_S_contig936.30833.1 vs. uniprot
Match: I0Z0S8_COCSC (Formyltetrahydrofolate deformylase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z0S8_COCSC)

HSP 1 Score: 141 bits (356), Expect = 2.950e-38
Identity = 67/122 (54.92%), Postives = 89/122 (72.95%), Query Frame = 0
Query:   61 IKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQRLKVDYTLMTIGAANTGVMEQALQELAGRYKMEWSITYRNRKQKVAILVSKDDHCLYDLLIRHRSGELDCVVSTIISNHDKL 182
            +KCPD+ GV+AA+A LL+G G NI+ +DQFT     VYFQR++ D T M +G AN  V+E+A+ E+A R+ MEW + Y    ++VAILVS+ DHCLYD+LIRHR+GEL C +  IISNH  L
Sbjct:    2 VKCPDRKGVIAALAQLLYGLGCNILASDQFT-AEEGVYFQRIRFDLTDMVVGTANKAVLERAIAEVADRFGMEWRLFYDGAVKRVAILVSRLDHCLYDILIRHRAGELKCEIPIIISNHPDL 122          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig936.30833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH40_ECTSI4.150e-11197.27ACT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8J4BZK0_9CHLO1.130e-4854.97ACT domain-containing protein n=2 Tax=Volvox TaxID... [more]
A0A836C2F7_9CHLO1.130e-4455.64ACT domain-containing protein n=1 Tax=Edaphochlamy... [more]
A0A835WEU7_CHLIN1.480e-4455.81ACT domain-containing protein n=2 Tax=Chlamydomona... [more]
A0A836B620_9CHLO2.390e-4455.81ACT domain-containing protein n=1 Tax=Chlamydomona... [more]
A8IBF9_CHLRE2.090e-4357.38Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
A0A7S0RP56_9CHLO3.180e-4351.08Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A5J4Y4F6_9CHLO2.850e-4258.73Formyltetrahydrofolate deformylase n=1 Tax=Treboux... [more]
A0A7S0VLY8_9CHLO1.040e-3846.76Hypothetical protein (Fragment) n=1 Tax=Polytomell... [more]
I0Z0S8_COCSC2.950e-3854.92Formyltetrahydrofolate deformylase n=1 Tax=Coccomy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004810Formyltetrahydrofolate deformylasePRINTSPR01575FFH4HYDRLASEcoord: 59..85
score: 36.42
coord: 91..103
score: 30.34
coord: 166..183
score: 29.37
coord: 144..166
score: 52.42
IPR004810Formyltetrahydrofolate deformylasePANTHERPTHR42706FAMILY NOT NAMEDcoord: 51..182
IPR002912ACT domainPFAMPF01842ACTcoord: 58..126
e-value: 1.4E-7
score: 31.2
IPR002912ACT domainPROSITEPS51671ACTcoord: 58..141
score: 8.826
NoneNo IPR availableGENE3D3.30.70.260coord: 53..142
e-value: 7.7E-21
score: 76.1
NoneNo IPR availableGENE3D3.40.50.170coord: 143..183
e-value: 5.1E-6
score: 28.2
NoneNo IPR availablePANTHERPTHR42706:SF1FORMYLTETRAHYDROFOLATE DEFORMYLASE 1, MITOCHONDRIALcoord: 51..182
NoneNo IPR availableSUPERFAMILY55021ACT-likecoord: 57..140
IPR036477Formyl transferase, N-terminal domain superfamilySUPERFAMILY53328Formyltransferasecoord: 144..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig936contigEcto-sp8_S_contig936:14016..17977 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig936.30833.1mRNA_Ecto-sp8_S_contig936.30833.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig936 14016..17977 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig936.30833.1 ID=prot_Ecto-sp8_S_contig936.30833.1|Name=mRNA_Ecto-sp8_S_contig936.30833.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=184bp
MSDLVAPTPARAGEAPGVAAAAGTAAAAAGTVGGGARPAVAELAGETASP
PPATFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQ
RLKVDYTLMTIGAANTGVMEQALQELAGRYKMEWSITYRNRKQKVAILVS
KDDHCLYDLLIRHRSGELDCVVSTIISNHDKLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004810PurU
IPR002912ACT_dom
IPR036477Formyl_transf_N_sf