prot_Ecto-sp8_S_contig9348.30811.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9348.30811.1
Unique Nameprot_Ecto-sp8_S_contig9348.30811.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length246
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9348.30811.1 vs. uniprot
Match: D7FPM2_ECTSI (Myst-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM2_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 2.030e-73
Identity = 171/213 (80.28%), Postives = 173/213 (81.22%), Query Frame = 0 
Query:   33 DALPNGSSTTPNGGGADGPTGKEPRVVEQQSTASAMSDAGTAGADQQSTARETAWKTPPAAASSGGEVGAGSAPLSPPEDRRSRPXXXXXSSPVKTPPLNGMAFSGALDIMALAASSRPRATTPSSXXXXXXXXXXXXXXXXXXGDDGSPASRGNGNGSCGLLQNKTTPAAGLGAALDMMASAVDARAPGALLSNGGDGVEGGQEERSTAGSR 245
            D  P  S     GGG  G  GKE  VVE       +SDAGTAGADQQS ARE AW+TP      GGEV AGSAPLSPPEDRRSRP     SSPVKTPPLNGMAFSGALDIMALAASSRPRATTPS XXXXXXXXXXXXXXXXXX DDGSPASRGNG GSCG LQNKTTPAAGLGAALDMMASAVDARAPGALLSNGGDGVEGGQEERSTAGSR
Sbjct: 1404 DPSPTESGGADVGGGGGG-RGKEXXVVEXXXXXXXVSDAGTAGADQQSIAREIAWETPXXXXXXGGEVVAGSAPLSPPEDRRSRPEAGAVSSPVKTPPLNGMAFSGALDIMALAASSRPRATTPSXXXXXXXXXXXXXXXXXXXXDDGSPASRGNGKGSCGPLQNKTTPAAGLGAALDMMASAVDARAPGALLSNGGDGVEGGQEERSTAGSR 1615
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BLAST of mRNA_Ecto-sp8_S_contig9348.30811.1 vs. uniprot
Match: A0A6H5JA25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA25_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 2.660e-72
Identity = 152/195 (77.95%), Postives = 155/195 (79.49%), Query Frame = 0 
Query:   51 PTGKEPRVVEQQSTASAMSDAGTAGADQQSTARETAWKTPPAAASSGGEVGAGSAPLSPPEDRRSRPXXXXXSSPVKTPPLNGMAFSGALDIMALAASSRPRATTPSSXXXXXXXXXXXXXXXXXXGDDGSPASRGNGNGSCGLLQNKTTPAAGLGAALDMMASAVDARAPGALLSNGGDGVEGGQEERSTAGSR 245
            PTGK PRVVEQ+STASA+SD GTAGADQQST RET W+TPPAAASSG E GAGSAPL PPEDRRSRP     SSPVKTP LNG  FSGALDIMALAASSRPRATTPSS                  GDDGSPASRGNGNGSC  LQNKTTPAAGLGAAL MMASAVDARAPGALLSNG   VEGGQEERS AGSR
Sbjct: 1130 PTGKIPRVVEQKSTASAVSDVGTAGADQQSTTRETTWETPPAAASSGDEDGAGSAPLFPPEDRRSRPEAGAVSSPVKTPALNG--FSGALDIMALAASSRPRATTPSSSRSPSQDRSSGA------GDDGSPASRGNGNGSCRPLQNKTTPAAGLGAALGMMASAVDARAPGALLSNG---VEGGQEERSPAGSR 1313
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9348.30811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPM2_ECTSI2.030e-7380.28Myst-related protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JA25_9PHAE2.660e-7277.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9348contigEcto-sp8_S_contig9348:2168..3223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9348.30811.1mRNA_Ecto-sp8_S_contig9348.30811.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9348 1980..5023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9348.30811.1 ID=prot_Ecto-sp8_S_contig9348.30811.1|Name=mRNA_Ecto-sp8_S_contig9348.30811.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=246bp
MSRLGGGDDAESSSARGDASASASAAAAAAAGDALPNGSSTTPNGGGADG
PTGKEPRVVEQQSTASAMSDAGTAGADQQSTARETAWKTPPAAASSGGEV
GAGSAPLSPPEDRRSRPEAGAVSSPVKTPPLNGMAFSGALDIMALAASSR
PRATTPSSSRSPSQDRSSSSGAGAVAGDDGSPASRGNGNGSCGLLQNKTT
PAAGLGAALDMMASAVDARAPGALLSNGGDGVEGGQEERSTAGSR*
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