prot_Ecto-sp8_S_contig9339.30799.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9339.30799.1
Unique Nameprot_Ecto-sp8_S_contig9339.30799.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length373
Homology
BLAST of mRNA_Ecto-sp8_S_contig9339.30799.1 vs. uniprot
Match: A0A6H5JFI0_9PHAE (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFI0_9PHAE)

HSP 1 Score: 479 bits (1233), Expect = 1.320e-165
Identity = 324/399 (81.20%), Postives = 333/399 (83.46%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMEKIENAAQRAHENDLAMFGGAXXXXXXXXXSAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------PASGNPSVRAGAGKREDGAVAGREGSXXXXXXXAAWDGVFEEGGQWYLDGQTHRDKLAVDAACQFFLTSEDLWVDAVVLAVADSEQPPHDATAAGGSSAGSIATTRRIDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPXXXXXXXXXXXDENTGLGGWQTVSVRMVDVAAEAEARCVKKEIKKAKXXXXXXXXEREKMLVEAMDADDAMGSYDPWGTGKYKGFEVAKDV 373
            MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQME+IE AAQ AHE DLAMFGGA         SAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXX                          PASGNPSVRAG  K E+GA AGREG XXXXXX AAWDGVFEEGGQWYLDGQ HRDKLAVDAACQ+FL SE LWVDAVVLA+ADSEQPPHDATAAG +SAG +ATTRR+DLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWP       XXXXDENTGLGGWQTVSVRMVDVAAEAEAR VKKE+K   XXXXXXXX REKMLVEAMDADDAMGSYDPWGTGKYKGFE+A D 
Sbjct:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQLAHEKDLAMFGGAGAGSGLGAGSAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDXXXXXXXXGSXXXRXXXXXXXXXXXXXXXXRPASGNPSVRAGDVKSEEGAAAGREGXXXXXXX-AAWDGVFEEGGQWYLDGQIHRDKLAVDAACQYFLNSEGLWVDAVVLALADSEQPPHDATAAGDASAGIMATTRRLDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPAPREMPPXXXXDENTGLGGWQTVSVRMVDVAAEAEARRVKKEVKXXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFEIANDA 398          
BLAST of mRNA_Ecto-sp8_S_contig9339.30799.1 vs. uniprot
Match: A0A4D9CZ19_9STRA (U1-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ19_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.070e-28
Identity = 139/393 (35.37%), Postives = 187/393 (47.58%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMEKIENAAQRAHENDLAMFGGAXXXXXXXXXSAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASGNPS-VRAGAG-----KREDGAVAGREGSXXXXXXXAAWDGVFEEGGQWYLDGQTHRDKLAVDAACQFFLTSEDLWVDAVVLAVADSEQPPHDATAA------------GGSSA--GSIATTRRIDLAYFEAGAEKETVLRGVEAAAVRLPAGEG--GAWPXXXXXXXXXXXDENTGLGGWQTVSVRMVDVAAEAEAR--CVKKEIKKAKXXXXXXXXEREKMLVEAMDADDAMGSYDPWGTGKYKGFEV 369
            MA YW S  ++ CK+C VW+ +++ S R H+ G +H + V EFF+ +RE K +G+  + +L +++ +IE AAQ   E D AMF                          XXXXXXXXX          XXXXXXXX    P    P  VR   G     ++E+  V G           A  +G +   G  YL+G+    +L     CQ ++  +D W +A+V  V  +  P    T              GG  A  G  A T+R +        E + V  GV +  +RL  GE   G       XXXXXX DE+TGLGGWQTVSVRMVD  AE +A    V+ E K+ K         R +ML EAM+ +DAM SYDP G G YKG ++
Sbjct:    1 MADYWKSTPKHCCKFCNVWMDDNKTSRRLHEGGARHKQAVEEFFKAQREAKRQGSIGDGELSKELREIEKAAQAQAEKDAAMF-----------------KTSVVTTVEXXXXXXXXXRPPTFSLSSRXXXXXXXXGVRHPXXXXPHRVRGDVGGWRDVEKEEKEVNGGSEDVTGGSAAAEVEGRYTVDGVTYLEGKAVETRLVRGTPCQVWVEKDDAWREAIVSRVEVTAVPNTSLTLRKFSVILGARRPDGGKEAKEGQAAVTQREE--------EAKEVEEGVLSDRIRLVEGEHSMGGVDTLPPXXXXXXVDEDTGLGGWQTVSVRMVDEEAERKASEAAVRAESKRRKEEDAQR---RARMLAEAMEGEDAMSSYDPHGRGIYKGMDL 365          
BLAST of mRNA_Ecto-sp8_S_contig9339.30799.1 vs. uniprot
Match: F0WHY0_9STRA (Uncharacterized protein AlNc14C105G6187 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHY0_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 8.440e-12
Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMEKIENAAQRAHENDL 80
            M  YW S ERYFCKYC +WL     S+R+H++ K+H++ + E  + KR+ K+K  + + DLK+Q+++IE  A      D+
Sbjct:    1 MTEYWKSNERYFCKYCDIWLQGDSISVRHHEKSKRHLDRIQEKLKAKRQAKVKSEREDKDLKKQLDEIERTAHARFAEDM 80          
BLAST of mRNA_Ecto-sp8_S_contig9339.30799.1 vs. uniprot
Match: A0A5J5BSD2_9ASTE (Matrin-type domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BSD2_9ASTE)

HSP 1 Score: 70.9 bits (172), Expect = 2.630e-10
Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMEKIENAAQRAHENDLAMF 83
            M  YWVSQ   +C +CK+++SN+ ASIRNH+ G++H + V++     R+DK+   + E +  R +E+IE  A+R+++ D+A F
Sbjct:    1 MTEYWVSQGNKWCDFCKIFISNNPASIRNHELGQRHKDNVSKKLTTMRQDKVAKEKEEKEAARALEQIEAKAKRSYQKDVATF 83          
BLAST of mRNA_Ecto-sp8_S_contig9339.30799.1 vs. uniprot
Match: A0A836CFV0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV0_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 8.820e-10
Identity = 68/224 (30.36%), Postives = 88/224 (39.29%), Query Frame = 0
Query:  213 WVDAVVLAVADSEQPPHDATAAGGSSAGSIATTRRIDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPXXXXXXXXXXX-------------------------------------------------------------DENTGLGGWQTVSVRMVDVAAEAEARCVKKEIKKA----KXXXXXXXXEREKMLVEAMDADDAMGSYDPWGTGKYKGFEVAK 371
            W+DA++L VA    P  D               RR  +AYF  GAE ETV+  + +  +R+PAGE   W                                                                         DENTG+G WQTV V       E +AR  K E+ K+    +  XXXX  ER+  L  AM+ADDAMGSYDP GTG+YKGF++ +
Sbjct:  337 WIDALILEVALVAVPNTDIR------------LRRHKVAYFAPGAEHETVVEDIPSDRLRIPAGEDAEWTAPDDAQLINVIIESDELKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPXXXXXXXDENTGIGRWQTVKVTTFS-QEELDARQAKAEVAKSAKQKRRAXXXXRAERDMELDLAMEADDAMGSYDPLGTGRYKGFDLER 547          
BLAST of mRNA_Ecto-sp8_S_contig9339.30799.1 vs. uniprot
Match: A0A397TAV1_9GLOM (Matrin-type domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TAV1_9GLOM)

HSP 1 Score: 68.9 bits (167), Expect = 8.950e-10
Identity = 30/82 (36.59%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMEKIENAAQRAHENDLAM 82
            M+ YWVSQ++++C+YC++++++++ S   H+QGKKH E V +F R  R    +  + E   KR++E+IE AA + ++ D+ +
Sbjct:    1 MSEYWVSQQKHWCQYCRIYIADNKPSRTMHEQGKKHKENVEKFLRDIRRRDHENRKEEEKTKRELERIERAAMKQYKKDIIL 82          
BLAST of mRNA_Ecto-sp8_S_contig9339.30799.1 vs. uniprot
Match: UPI000C1D7CA3 (zinc finger protein ZOP1 isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D7CA3)

HSP 1 Score: 68.9 bits (167), Expect = 1.260e-9
Identity = 32/83 (38.55%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMEKIENAAQRAHENDLAMF 83
            M  +WVSQ   +C +CK+++SN+ ASIRNH+ G +H + VA+     R+DK+   + + +  R +E+IE  A+R+++ DL +F
Sbjct:    1 MTEFWVSQGNKWCDFCKIYISNNPASIRNHELGTRHKDNVAKKLNTMRQDKVAKEKEQKEAARVLEQIEAKAKRSYQKDLEVF 83          
BLAST of mRNA_Ecto-sp8_S_contig9339.30799.1 vs. uniprot
Match: Q66IB2_DANRE (Zgc:112384 protein (Fragment) n=1 Tax=Danio rerio TaxID=7955 RepID=Q66IB2_DANRE)

HSP 1 Score: 68.9 bits (167), Expect = 1.370e-9
Identity = 33/85 (38.82%), Postives = 53/85 (62.35%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMEKIENAAQRAHENDLAMFGG 85
            MA YW SQ R FC+YCK W+++++ S+  H++GK H E VA   ++ R+  +  A+ E  + +    +E+AAQ+A+E DL    G
Sbjct:    1 MADYWKSQPRKFCQYCKCWIADNKPSVEFHERGKNHKENVAAKIQEIRKKSVAKAKQEKKMSKDFAAMEDAAQKAYEEDLKRLAG 85          
BLAST of mRNA_Ecto-sp8_S_contig9339.30799.1 vs. uniprot
Match: A0A2P5FZ54_TREOI (U1 small nuclear ribonucleoprotein C n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5FZ54_TREOI)

HSP 1 Score: 67.8 bits (164), Expect = 2.730e-9
Identity = 32/80 (40.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMEKIENAAQRAHENDL 80
            M  YWVSQ   +C +CK++LSN+ ASIRNH+ G++H + VA+     R++K    + E +  R +E+IE  A+R+++ D+
Sbjct:    1 MTEYWVSQGNKWCDFCKIYLSNNPASIRNHELGQRHKDNVAKKLADMRKEKAAKEKEEKEATRLLEQIETKAKRSYQKDM 80          
BLAST of mRNA_Ecto-sp8_S_contig9339.30799.1 vs. uniprot
Match: A0A2I0I759_PUNGR (zinc finger protein ZOP1 n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I759_PUNGR)

HSP 1 Score: 67.8 bits (164), Expect = 2.870e-9
Identity = 32/83 (38.55%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMEKIENAAQRAHENDLAMF 83
            M  YWVSQ   +C +CK+++SN+ ASIRNH+ G++H + VA+     R+DK    + + +  R +++IE  A+R+++ D+A F
Sbjct:    1 MTEYWVSQGNKWCDFCKIFISNNPASIRNHELGQRHKDNVAKKLDDMRKDKAAKEKQQQEAARAIQQIEAKAKRSYQKDVATF 83          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9339.30799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFI0_9PHAE1.320e-16581.20Matrin-type domain-containing protein n=2 Tax=Ecto... [more]
A0A4D9CZ19_9STRA1.070e-2835.37U1-type domain-containing protein n=2 Tax=Monodops... [more]
F0WHY0_9STRA8.440e-1240.00Uncharacterized protein AlNc14C105G6187 n=1 Tax=Al... [more]
A0A5J5BSD2_9ASTE2.630e-1039.76Matrin-type domain-containing protein n=1 Tax=Nyss... [more]
A0A836CFV0_9STRA8.820e-1030.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A397TAV1_9GLOM8.950e-1036.59Matrin-type domain-containing protein n=1 Tax=Glom... [more]
UPI000C1D7CA31.260e-938.55zinc finger protein ZOP1 isoform X1 n=2 Tax=Olea e... [more]
Q66IB2_DANRE1.370e-938.82Zgc:112384 protein (Fragment) n=1 Tax=Danio rerio ... [more]
A0A2P5FZ54_TREOI2.730e-940.00U1 small nuclear ribonucleoprotein C n=2 Tax=Canna... [more]
A0A2I0I759_PUNGR2.870e-938.55zinc finger protein ZOP1 n=1 Tax=Punica granatum T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 311..345
NoneNo IPR availableCOILSCoilCoilcoord: 364..373
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availableGENE3D3.30.160.60coord: 9..67
e-value: 2.0E-8
score: 36.2
NoneNo IPR availablePANTHERPTHR45691:SF6PROTEIN DIAPHANOUScoord: 42..293
NoneNo IPR availablePANTHERPTHR45691FAMILY NOT NAMEDcoord: 42..293
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 8..43
e-value: 7.9E-7
score: 38.7
IPR013085U1-C, C2H2-type zinc fingerPFAMPF06220zf-U1coord: 9..43
e-value: 3.3E-10
score: 39.6
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 11..42
score: 9.852
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 9..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9339contigEcto-sp8_S_contig9339:1..5794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9339.30799.1mRNA_Ecto-sp8_S_contig9339.30799.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9339 1..5794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9339.30799.1 ID=prot_Ecto-sp8_S_contig9339.30799.1|Name=mRNA_Ecto-sp8_S_contig9339.30799.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=373bp
MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKRED
KLKGAQSESDLKRQMEKIENAAQRAHENDLAMFGGAGAGSGSGAGSAGPP
PPPPPPGGPPPPPPPPPAGAPPPPPPRPNTPPPPPPPPPRPASGNPSVRA
GAGKREDGAVAGREGSGGGGGGGAAWDGVFEEGGQWYLDGQTHRDKLAVD
AACQFFLTSEDLWVDAVVLAVADSEQPPHDATAAGGSSAGSIATTRRIDL
AYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPPPQQMPPPPPPDENTGLG
GWQTVSVRMVDVAAEAEARCVKKEIKKAKKQKREEKTEREKMLVEAMDAD
DAMGSYDPWGTGKYKGFEVAKDV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003604Matrin/U1-like-C_Znf_C2H2
IPR013085U1-CZ_Znf_C2H2
IPR000690Matrin/U1-C_Znf_C2H2
IPR036236Znf_C2H2_sf