prot_Ecto-sp8_S_contig9294.30740.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9294.30740.1
Unique Nameprot_Ecto-sp8_S_contig9294.30740.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length227
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9294.30740.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 1.060e-116
Identity = 194/216 (89.81%), Postives = 201/216 (93.06%), Query Frame = 0 
Query:    1 MGCAPSRDSSRRQEPKPCSCLCNGCYPYLCCGAPLEGQTTTAYGEGSAVPLPEGGHQSGSAEGKPVMHGSHDYHWIGGGTSGKIEAGASHKPETPAGGAAAMAHGEESKVDVNIVAPSGAAGLSAKADISAAGSXXXXXXXIDSSAIKSGEIFASTGGSSSYAPSSSINPDAAATVKVEGAEGKTPMEWSASTGDASADMSGKPPIAGGSVNTPSM 216
            MGCAPSRDSSRRQEPKPCSCLCNGCYPYLCCGAP EGQTTT+YGE SAVPLPEGGHQ+GSA  KPVMHGSHDYHWIGGGTSGKIE GA+HKPETPAGGAAAMAHGEESK+DVN+VAPSGAAGLS +A ISAAGS       IDSSAIKSGEIFASTGGSSSYAPSSSI+PDAAATVKVEGAEGKTPMEWSAS GDASADMSGKPPIAGGSVNTPSM
Sbjct:    1 MGCAPSRDSSRRQEPKPCSCLCNGCYPYLCCGAPSEGQTTTSYGESSAVPLPEGGHQAGSAGDKPVMHGSHDYHWIGGGTSGKIETGAAHKPETPAGGAAAMAHGEESKMDVNVVAPSGAAGLSTEATISAAGSAAGDSGRIDSSAIKSGEIFASTGGSSSYAPSSSIDPDAAATVKVEGAEGKTPMEWSASAGDASADMSGKPPIAGGSVNTPSM 216
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BLAST of mRNA_Ecto-sp8_S_contig9294.30740.1 vs. uniprot
Match: A0A6H5K9M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 4.030e-18
Identity = 59/86 (68.60%), Postives = 64/86 (74.42%), Query Frame = 0 
Query:  131 AAGSXXXXXXXIDSSAIKSGEIFASTGGSSSYAPSSSINPDAAATVKVEGAEGKTPMEWSASTGDASADMSGKPPIAGGSVNTPSM 216
            AAGS       IDSSAIKSGE+FAS          SSI+PDA A+VKVEGAEG+TPMEW+AS GDASA MSGK PIAGGSVNTP M
Sbjct:   12 AAGSAAGDSGKIDSSAIKSGEMFAS----------SSIDPDATASVKVEGAEGQTPMEWTASAGDASA-MSGKLPIAGGSVNTPPM 86
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9294.30740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB94_ECTSI1.060e-11689.81Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus ... [more]
A0A6H5K9M1_9PHAE4.030e-1868.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9294contigEcto-sp8_S_contig9294:2079..7287 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9294.30740.1mRNA_Ecto-sp8_S_contig9294.30740.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9294 2079..7287 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9294.30740.1 ID=prot_Ecto-sp8_S_contig9294.30740.1|Name=mRNA_Ecto-sp8_S_contig9294.30740.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=227bp
MGCAPSRDSSRRQEPKPCSCLCNGCYPYLCCGAPLEGQTTTAYGEGSAVP
LPEGGHQSGSAEGKPVMHGSHDYHWIGGGTSGKIEAGASHKPETPAGGAA
AMAHGEESKVDVNIVAPSGAAGLSAKADISAAGSAAGDSGKIDSSAIKSG
EIFASTGGSSSYAPSSSINPDAAATVKVEGAEGKTPMEWSASTGDASADM
SGKPPIAGGSVNTPSMSGGVETPSMSG
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