prot_Ecto-sp8_S_contig9264.30684.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9264.30684.1
Unique Nameprot_Ecto-sp8_S_contig9264.30684.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length134
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9264.30684.1 vs. uniprot
Match: A0A6H5JJC0_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC0_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 9.460e-41
Identity = 90/106 (84.91%), Postives = 93/106 (87.74%), Query Frame = 0 
Query:    1 TKPTAGGPPVPASQDSSSLSSQSGKKMGFGLALGVSSKKAAGADEAAAGKGGVDADDDDGALTDLLLAAVQDVEDVVDASFVEELENASITRPMETRGDGKGKGGP 106
            TKPTAGGPPVPASQ+SSS SSQSGK MGF L LGVSSKKA GADEAAA  GGV      GALTDLLLAAVQDV+DVVDASFVEELENASITRPMETRG+GKGKGGP
Sbjct:  468 TKPTAGGPPVPASQESSSSSSQSGKTMGFALPLGVSSKKAPGADEAAARTGGVGDXXXXGALTDLLLAAVQDVKDVVDASFVEELENASITRPMETRGNGKGKGGP 573
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BLAST of mRNA_Ecto-sp8_S_contig9264.30684.1 vs. uniprot
Match: D7FMN8_ECTSI (Survivin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN8_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 2.950e-34
Identity = 80/100 (80.00%), Postives = 82/100 (82.00%), Query Frame = 0 
Query:    1 TKPTAGGPPVPASQDSSSLSSQSGKKMGFGLALGVSSKKAAGADEAAAGKGGVDADDDDGALTDLLLAAVQDVEDVVDASFVEELENASITRPMETRGDG 100
            TKPTAGGPPV             GK MGFGLALGV SKKAAGADEAAAGKGGV  DD+DGALTDLLLAAVQDVEDVVDASFVEELENASITRPME RG+G
Sbjct:  837 TKPTAGGPPVXXXXXXXXXXXXXGKTMGFGLALGVFSKKAAGADEAAAGKGGVGDDDNDGALTDLLLAAVQDVEDVVDASFVEELENASITRPMEIRGNG 936
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9264.30684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJC0_9PHAE9.460e-4184.91UBC core domain-containing protein n=1 Tax=Ectocar... [more]
D7FMN8_ECTSI2.950e-3480.00Survivin n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9264contigEcto-sp8_S_contig9264:2347..4448 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9264.30684.1mRNA_Ecto-sp8_S_contig9264.30684.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9264 2347..4448 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9264.30684.1 ID=prot_Ecto-sp8_S_contig9264.30684.1|Name=mRNA_Ecto-sp8_S_contig9264.30684.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=134bp
TKPTAGGPPVPASQDSSSLSSQSGKKMGFGLALGVSSKKAAGADEAAAGK
GGVDADDDDGALTDLLLAAVQDVEDVVDASFVEELENASITRPMETRGDG
KGKGGPTTRSSTAAAAAGIGGSAAPARGRGSKGS
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