prot_Ecto-sp8_S_contig9250.30663.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9250.30663.1
Unique Nameprot_Ecto-sp8_S_contig9250.30663.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length99
Homology
BLAST of mRNA_Ecto-sp8_S_contig9250.30663.1 vs. uniprot
Match: A0A6H5KFK9_9PHAE (HELP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK9_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 3.370e-60
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0
Query:    1 MHPDKAHMATGQEGSCPIVLVWDSASRPLKTKARLQLGDDKKGVSQVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFSLNSDE 99
            MHPDKAH+ATGQEGSCPIVLVWDSASRPLKTKARLQLGDDKKGVSQVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFSLNSDE
Sbjct:  400 MHPDKAHVATGQEGSCPIVLVWDSASRPLKTKARLQLGDDKKGVSQVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFSLNSDE 498          
BLAST of mRNA_Ecto-sp8_S_contig9250.30663.1 vs. uniprot
Match: D7G0Y1_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y1_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 5.520e-59
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0
Query:    1 MHPDKAHMATGQEGSCPIVLVWDSASRPLKTKARLQLGDDKKGVSQVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFSLNSDE 99
            MHPDKAH+ATGQEGSCPIVLVWDSASRPLKTKARLQLGDDKKGVSQVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFS NSDE
Sbjct: 1286 MHPDKAHVATGQEGSCPIVLVWDSASRPLKTKARLQLGDDKKGVSQVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFSFNSDE 1384          
BLAST of mRNA_Ecto-sp8_S_contig9250.30663.1 vs. uniprot
Match: D7FR21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR21_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 2.710e-7
Identity = 30/93 (32.26%), Postives = 51/93 (54.84%), Query Frame = 0
Query:    1 MHPDKAHMATGQEGSCPIVLVWDSASRPLKTKARLQLGDDKKGVSQVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCF 93
            MHP     ATG+ G+ P +++WD+A+  ++T  ++  G  ++ V+ + FS +G LLA   +D  H + V  WE G L+      ++  L  CF
Sbjct:  367 MHPSGRLAATGEVGTEPKIIIWDTAT--MQT-VKVIKGFHRRAVTLLAFSENGALLASVGQDDNHCLAVHDWEKGKLQHTGPTDMRAVLGCCF 456          
BLAST of mRNA_Ecto-sp8_S_contig9250.30663.1 vs. uniprot
Match: A0A6J0XBB0_ODOVR (echinoderm microtubule-associated protein-like 5 isoform X7 n=5 Tax=Cervidae TaxID=9850 RepID=A0A6J0XBB0_ODOVR)

HSP 1 Score: 55.5 bits (132), Expect = 9.360e-7
Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 0
Query:    1 MHPDKAHMATGQEGSCPIVLVWDS-ASRPLKTKARLQLGDDKKGVSQVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQAR 82
            +HP +  +ATGQ G  P + +WD+  ++PL        G  + GV  V FS+DG+ LA A  D GHTV+++ W+ G   C  R
Sbjct:  735 VHPVRDLVATGQVGRDPSIHIWDTETTKPLSVLK----GYHQYGVCAVDFSADGRRLASAGLDDGHTVVLWDWKRGERLCVTR 813          
BLAST of mRNA_Ecto-sp8_S_contig9250.30663.1 vs. uniprot
Match: A0A7S1CBA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBA4_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.650e-6
Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    1 MHPDKAHMATGQEGSCPIVLVWDSASRPLKTKARLQLGDDKKGVSQVCFSS-DGKLLAVACEDKGHTVMVFRWE 73
            MHPD  H+ATGQ G  P V+VW + +  ++T + ++ G  ++ V  V F   DG+LLA   +D  HT+ V+ WE
Sbjct:  174 MHPDGIHVATGQMGRKPRVVVWRTDT--METVSVIE-GFHRRAVCAVAFDKKDGRLLATVGQDDDHTLFVYDWE 244          
BLAST of mRNA_Ecto-sp8_S_contig9250.30663.1 vs. uniprot
Match: A0A212CTF1_CEREH (EML5 (Fragment) n=2 Tax=Artiodactyla TaxID=91561 RepID=A0A212CTF1_CEREH)

HSP 1 Score: 53.9 bits (128), Expect = 3.120e-6
Identity = 30/76 (39.47%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    1 MHPDKAHMATGQEGSCPIVLVWDS-ASRPLKTKARLQLGDDKKGVSQVCFSSDGKLLAVACEDKGHTVMVFRWESG 75
            +HP +  +ATGQ G  P + +WD+  ++PL     +  G  + GV  V FS+DG+ LA A  D GHTV+++ W+ G
Sbjct:  348 VHPVRDLVATGQVGRDPSIHIWDTETTKPLS----ILKGYHQYGVCAVDFSADGRRLASAGLDDGHTVVLWDWKRG 419          
BLAST of mRNA_Ecto-sp8_S_contig9250.30663.1 vs. uniprot
Match: UPI001CC2A97C (echinoderm microtubule-associated protein-like 5 isoform X5 n=2 Tax=Cervus TaxID=9859 RepID=UPI001CC2A97C)

HSP 1 Score: 53.9 bits (128), Expect = 3.250e-6
Identity = 30/76 (39.47%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    1 MHPDKAHMATGQEGSCPIVLVWDS-ASRPLKTKARLQLGDDKKGVSQVCFSSDGKLLAVACEDKGHTVMVFRWESG 75
            +HP +  +ATGQ G  P + +WD+  ++PL     +  G  + GV  V FS+DG+ LA A  D GHTV+++ W+ G
Sbjct:  735 VHPVRDLVATGQVGRDPSIHIWDTETTKPLS----ILKGYHQYGVCAVDFSADGRRLASAGLDDGHTVVLWDWKRG 806          
BLAST of mRNA_Ecto-sp8_S_contig9250.30663.1 vs. uniprot
Match: UPI001CC289DD (echinoderm microtubule-associated protein-like 5 isoform X4 n=2 Tax=Cervus TaxID=9859 RepID=UPI001CC289DD)

HSP 1 Score: 53.9 bits (128), Expect = 3.250e-6
Identity = 30/76 (39.47%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    1 MHPDKAHMATGQEGSCPIVLVWDS-ASRPLKTKARLQLGDDKKGVSQVCFSSDGKLLAVACEDKGHTVMVFRWESG 75
            +HP +  +ATGQ G  P + +WD+  ++PL     +  G  + GV  V FS+DG+ LA A  D GHTV+++ W+ G
Sbjct:  735 VHPVRDLVATGQVGRDPSIHIWDTETTKPLS----ILKGYHQYGVCAVDFSADGRRLASAGLDDGHTVVLWDWKRG 806          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9250.30663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KFK9_9PHAE3.370e-6098.99HELP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G0Y1_ECTSI5.520e-5997.98N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
D7FR21_ECTSI2.710e-732.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6J0XBB0_ODOVR9.360e-738.55echinoderm microtubule-associated protein-like 5 i... [more]
A0A7S1CBA4_9STRA1.650e-640.54Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A212CTF1_CEREH3.120e-639.47EML5 (Fragment) n=2 Tax=Artiodactyla TaxID=91561 R... [more]
UPI001CC2A97C3.250e-639.47echinoderm microtubule-associated protein-like 5 i... [more]
UPI001CC289DD3.250e-639.47echinoderm microtubule-associated protein-like 5 i... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..98
e-value: 8.8E-19
score: 69.4
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 1..80
NoneNo IPR availablePANTHERPTHR13720:SF33ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE 6coord: 1..80
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9250contigEcto-sp8_S_contig9250:2850..4195 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9250.30663.1mRNA_Ecto-sp8_S_contig9250.30663.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9250 2838..4195 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9250.30663.1 ID=prot_Ecto-sp8_S_contig9250.30663.1|Name=mRNA_Ecto-sp8_S_contig9250.30663.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=99bp
MHPDKAHMATGQEGSCPIVLVWDSASRPLKTKARLQLGDDKKGVSQVCFS
SDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFSLNSDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf