prot_Ecto-sp8_S_contig9217.30600.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9217.30600.1
Unique Nameprot_Ecto-sp8_S_contig9217.30600.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length58
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9217.30600.1 vs. uniprot
Match: D7FWK1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK1_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 2.230e-27
Identity = 55/58 (94.83%), Postives = 55/58 (94.83%), Query Frame = 0 
Query:    1 MSHGGRRSGGGGPRISYTSRSAPIPINREKRGGGGPSPRRHPAAQEPEPHSAYPDLAD 58
            MSHGGRRSGGGGPRISYTSRSAPIPIN EKRGGGGPSPRRHPA QEPEP SAYPDLAD
Sbjct:    1 MSHGGRRSGGGGPRISYTSRSAPIPINPEKRGGGGPSPRRHPAVQEPEPQSAYPDLAD 58
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9217.30600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWK1_ECTSI2.230e-2794.83LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9217contigEcto-sp8_S_contig9217:119..804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9217.30600.1mRNA_Ecto-sp8_S_contig9217.30600.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9217 119..1156 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9217.30600.1 ID=prot_Ecto-sp8_S_contig9217.30600.1|Name=mRNA_Ecto-sp8_S_contig9217.30600.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=58bp
MSHGGRRSGGGGPRISYTSRSAPIPINREKRGGGGPSPRRHPAAQEPEPH
SAYPDLAD
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